RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.91	□□□□□ -0.34
PPHLN1-223	ENST00000610488	IGHV5-51	A0A0C4DH38	117 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	PIPSL	A2A3N6	862 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	SLC22A3	O75751	556 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	CCNYL3	P0C7X3	344 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	PRPH2	P23942	346 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	COLEC12	Q5KU26	742 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	ADNP2	Q6IQ32	1131 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	CYB5D1	Q6P9G0	228 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	KLHL35	Q6PF15	583 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	C16orf89	Q6UX73	402 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	LAS2	Q8IYD9	372 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	DEFB107A	Q8IZN7	70 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	DSEL	Q8IZU8	1212 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	LIX1	Q8N485	282 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	HUS1B	Q8NHY5	278 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	KLHL6	Q8WZ60	621 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	TEX37	Q96LM6	180 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	MRPL1	Q9BYD6	325 aa	Known RBP	12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	MMADHC	Q9H3L0	296 aa	Predicted RBP	12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	PELI2	Q9HAT8	420 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	BRF2	Q9HAW0	419 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	PDE7B	Q9NP56	450 aa		12.9	□□□□□ -0.34
PPHLN1-223	ENST00000610488	CDC14C	A4D256	554 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488		A8MUI8	341 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	MAGEB17	A8MXT2	336 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	FBP2	O00757	339 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	MRAS	O14807	208 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	NRP2	O60462	931 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	TIAF1	O95411	115 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	FGF5	P12034	268 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	HSD3B1	P14060	373 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	NELFE	P18615	380 aa	Known RBP	12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	HSD3B2	P26439	372 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	KCNK10	P57789	538 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	YBX1	P67809	324 aa	Known RBP	12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	KIAA0040	Q15053	153 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	BLOC1S3	Q6QNY0	202 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	OOSP2	Q86WS3	158 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	SCUBE1	Q8IWY4	988 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	KRT78	Q8N1N4	520 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	FAM13C	Q8NE31	585 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	UBE2E3	Q969T4	207 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ABHD17A	Q96GS6	310 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	APIP	Q96GX9	242 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	CLPTM1L	Q96KA5	538 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	MAP3K3	Q99759	626 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	SPNS1	Q9H2V7	528 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	CUEDC1	Q9NWM3	386 aa	Predicted RBP	12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	NDE1	Q9NXR1	346 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ASIC5	Q9NY37	505 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	VPS29	Q9UBQ0	182 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	EPHA6	Q9UF33	1036 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	RARRES3	Q9UL19	164 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	RELN	P78509	3460 aa		12.89	□□□□□ -0.35
PPHLN1-223	ENST00000610488	FAM234B	A2RU67	622 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	BBIP1	A8MTZ0	92 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	NPIPB8	E9PQR5	432 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ANGPT2	O15123	496 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	FOLR1	P15328	257 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	CAPN3	P20807	821 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	MAPK1	P28482	360 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	IL12A	P29459	219 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	SHMT2	P34897	504 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	CCR8	P51685	355 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	POLR2J	P52435	117 aa	Known RBP	12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	RPS13	P62277	151 aa	Known RBP	12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	TBL3	Q12788	808 aa	Known RBP	12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	DNASE1L3	Q13609	305 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	VPS26B	Q4G0F5	336 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	C10orf62	Q5T681	223 aa	Predicted RBP	12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ICE2	Q659A1	982 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ARMC6	Q6NXE6	501 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	PARP9	Q8IXQ6	854 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ULK2	Q8IYT8	1036 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ZNF740	Q8NDX6	193 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	OR4E2	Q8NGC2	313 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	PROKR1	Q8TCW9	393 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	CT55	Q8WUE5	264 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	LCN9	Q8WX39	176 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	SPDL1	Q96EA4	605 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	AIF1L	Q9BQI0	150 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	TWSG1	Q9GZX9	223 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	RAB33B	Q9H082	229 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	TMEM45A	Q9NWC5	275 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	HRASLS2	Q9NWW9	162 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	SOHLH2	Q9NX45	425 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	KCND3	Q9UK17	655 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	NDUFAF1	Q9Y375	327 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	TMED5	Q9Y3A6	229 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	OR6C74	A6NCV1	312 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	OR5K3	A6NET4	321 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	TLCD2	A6NGC4	264 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	CCDC154	A6NI56	674 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ANKRD28	O15084	1053 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	SH3BGRL	O75368	114 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	ETHE1	O95571	254 aa		12.88	□□□□□ -0.35
PPHLN1-223	ENST00000610488	NTRK1	P04629	796 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms