RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 KANSL1Q7Z3B3 1105 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 TICAM1Q8IUC6 712 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 OR4N4Q8N0Y3 316 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 C19orf47Q8N9M1 422 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 HIPK4Q8NE63 616 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 OR8K5Q8NH50 307 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 UTP15Q8TED0 518 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 SMIM10Q96HG1 83 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 PHF12Q96QT6 1004 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 FAIM2Q9BWQ8 316 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 SLC6A13Q9NSD5 602 aa16.78■□□□□ 0.28
SHKBP1-224ENST00000600718 SCELO95171 688 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 CFIP05156 583 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 GSNP06396 782 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 ZCCHC18P0CG32 403 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 HTR1EP28566 365 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 ALDH4A1P30038 563 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 PPM1FP49593 454 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 RAB8AP61006 207 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 AP2B1P63010 937 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 BTN3A2P78410 334 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 SUZ12Q15022 739 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 GTDC1Q4AE62 458 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 ZC3H12BQ5HYM0 836 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 ZNF621Q6ZSS3 439 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 DHFR2Q86XF0 187 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 CLECL1Q8IZS7 167 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 FAM47BQ8NA70 645 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 BHLHE22Q8NFJ8 381 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 ZDHHC12Q96GR4 267 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 TCTN2Q96GX1 697 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 CD180Q99467 661 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 CPPED1Q9BRF8 314 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 COPS7BQ9H9Q2 264 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 S100A14Q9HCY8 104 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 GMPR2Q9P2T1 348 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 NKX1-2Q9UD57 310 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 PCDHGB4Q9UN71 923 aa16.77■□□□□ 0.28
SHKBP1-224ENST00000600718 SLC9B1P1A6NJY1 282 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 H0Y3Z8 333 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 NVLO15381 856 aaKnown RBP16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 ZNF888P0CJ79 500 aaPredicted RBP16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 ALPPL2P10696 532 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 ERFP50548 548 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 NR1D2Q14995 579 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 RCN1Q15293 331 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 CMPK2Q5EBM0 449 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 ZCCHC8Q6NZY4 707 aaKnown RBP16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 ABHD13Q7L211 337 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 IFNEQ86WN2 208 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 PTRH1Q86Y79 214 aaKnown RBP16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 GOT1L1Q8NHS2 421 aaPredicted RBP16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 SAP25Q8TEE9 199 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 AHCYL2Q96HN2 611 aaKnown RBP16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 MAP3K3Q99759 626 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 NLNQ9BYT8 704 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 LYARQ9NX58 379 aaKnown RBP16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 ASB4Q9Y574 426 aa16.77■□□□□ 0.27
SHKBP1-224ENST00000600718 A6NHS1 94 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 P2RX6O15547 441 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 MPEG1Q2M385 716 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 MUM1Q2TAK8 710 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 MMP21Q8N119 569 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 NCSTNQ92542 709 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 LRGUKQ96M69 825 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 ZNF583Q96ND8 569 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 TRIM15Q9C019 465 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 CAPN10Q9HC96 672 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 FAM60AQ9NP50 221 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 TEX10Q9NXF1 929 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 TAS2R7Q9NYW3 318 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 EHD3Q9NZN3 535 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 ACTR3BQ9P1U1 418 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 STX18Q9P2W9 335 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 PADI4Q9UM07 663 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 SLC6A14Q9UN76 642 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 ERVK-11Q9UQG0 969 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 PCDHB3Q9Y5E6 796 aa16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 TP53BP1Q12888 1972 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-224ENST00000600718 IGHV1OR21-1A0A087WYE8 117 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 A0A1W2PRB8 838 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 TLCD2A6NGC4 264 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 EVPLLA8MZ36 301 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 EPN2O95208 641 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 ZNF10P21506 573 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 ALDH9A1P49189 494 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 OR1D5P58170 312 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 ANGPT1Q15389 498 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 FXNQ16595 210 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 PRSS53Q2L4Q9 553 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 NDUFAF5Q5TEU4 345 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 FAM92BQ6ZTR7 304 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 MCATQ8IVS2 390 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 DNAJC22Q8N4W6 341 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 CSNK1A1LQ8N752 337 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 TNIP2Q8NFZ5 429 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 OR6C4Q8NGE1 309 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 OR4A15Q8NGL6 344 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 CIDECQ96AQ7 238 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 SERINC2Q96SA4 455 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms