RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CDH13P55290 713 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 LIM2P55344 173 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 RAB38P57729 211 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 HERVK_113P63132 956 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 DDX39BQ13838 428 aaKnown RBP14.8□□□□□ -0.04
RPS28-203ENST00000600659 ZRSR2Q15696 482 aaKnown RBP14.8□□□□□ -0.04
RPS28-203ENST00000600659 ZNF678Q5SXM1 525 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 DEPDC1Q5TB30 811 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 KHDRBS2Q5VWX1 349 aaKnown RBP14.8□□□□□ -0.04
RPS28-203ENST00000600659 LETMD1Q6P1Q0 360 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 PRICKLE2Q7Z3G6 844 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 MREGQ8N565 214 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 OR4F6Q8NGB9 312 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 SERINC2Q96SA4 455 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 MTERF1Q99551 399 aaKnown RBP14.8□□□□□ -0.04
RPS28-203ENST00000600659 TUBB6Q9BUF5 446 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 SORBS1Q9BX66 1292 aaKnown RBP14.8□□□□□ -0.04
RPS28-203ENST00000600659 ERVK-6Q9BXR3 956 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 C12orf65Q9H3J6 166 aaKnown RBP14.8□□□□□ -0.04
RPS28-203ENST00000600659 SEMA4BQ9NPR2 832 aaPredicted RBP14.8□□□□□ -0.04
RPS28-203ENST00000600659 NECTIN3Q9NQS3 549 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 PCDHGA11Q9Y5H2 935 aa14.8□□□□□ -0.04
RPS28-203ENST00000600659 TCRBV16S1A1N1A0A5B0 115 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 PYCARD-AS1I3L0S3 204 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 B3GALT2O43825 422 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 GLRA3O75311 464 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 CLDN9O95484 217 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 ITGAMP11215 1152 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 TSPAN8P19075 237 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 MAOAP21397 527 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 JAK1P23458 1154 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 ATP5F1P24539 256 aaPredicted RBP14.79□□□□□ -0.04
RPS28-203ENST00000600659 MTTPP55157 894 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 RPS13P62277 151 aaKnown RBP14.79□□□□□ -0.04
RPS28-203ENST00000600659 SLC18A2Q05940 514 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 TMEM35AQ53FP2 167 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 SLC6A19Q695T7 634 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 ATG14Q6ZNE5 492 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 MYLK4Q86YV6 388 aaPredicted RBP14.79□□□□□ -0.04
RPS28-203ENST00000600659 HPS6Q86YV9 775 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 KBTBD2Q8IY47 623 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 TEX19Q8NA77 164 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 BRIX1Q8TDN6 353 aaKnown RBP14.79□□□□□ -0.04
RPS28-203ENST00000600659 CMTM7Q96FZ5 175 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 VPS50Q96JG6 964 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 KCNC2Q96PR1 638 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 TRIM4Q9C037 500 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 LGALS13Q9UHV8 139 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 ADGRE2Q9UHX3 823 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 PPT2Q9UMR5 302 aa14.79□□□□□ -0.04
RPS28-203ENST00000600659 HEMK1Q9Y5R4 338 aaPredicted RBP14.79□□□□□ -0.04
RPS28-203ENST00000600659 SAP18O00422 153 aaKnown RBP14.78□□□□□ -0.04
RPS28-203ENST00000600659 PLIN3O60664 434 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 HIST1H1TP22492 207 aaPredicted RBP14.78□□□□□ -0.04
RPS28-203ENST00000600659 HPDP32754 393 aaPredicted RBP14.78□□□□□ -0.04
RPS28-203ENST00000600659 CRHR1P34998 444 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 NEK2P51955 445 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 CCNG1P51959 295 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 PRKAA2P54646 552 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 TLE1Q04724 770 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 CLCQ05315 142 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 NSDHLQ15738 373 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 SFT2D3Q587I9 215 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 PLAG1Q6DJT9 500 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 JMJD6Q6NYC1 403 aaPredicted RBP14.78□□□□□ -0.04
RPS28-203ENST00000600659 PAPD4Q6PIY7 484 aaKnown RBP14.78□□□□□ -0.04
RPS28-203ENST00000600659 ACOT4Q8N9L9 421 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 FAM47BQ8NA70 645 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 METTL21AQ8WXB1 218 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 L3HYPDHQ96EM0 354 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 FAR2Q96K12 515 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 MAPKAP1Q9BPZ7 522 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 TBCDQ9BTW9 1192 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 PRDM9Q9NQV7 894 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 PSD3Q9NYI0 1048 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 C19orf25Q9UFG5 118 aaPredicted RBP14.78□□□□□ -0.04
RPS28-203ENST00000600659 DCDC2Q9UHG0 476 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 MMACHCQ9Y4U1 282 aa14.78□□□□□ -0.04
RPS28-203ENST00000600659 A0A088AWK7 358 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 FOXE1O00358 373 aaPredicted RBP14.77□□□□□ -0.04
RPS28-203ENST00000600659 PRMT3O60678 531 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 DPM1O60762 260 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 KRT15P19012 456 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 IMPDH1P20839 514 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 ZNF10P21506 573 aaPredicted RBP14.77□□□□□ -0.04
RPS28-203ENST00000600659 BSGP35613 385 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 FRG2Q64ET8 278 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 B3GNTL1Q67FW5 361 aaPredicted RBP14.77□□□□□ -0.04
RPS28-203ENST00000600659 MRM1Q6IN84 353 aaKnown RBP14.77□□□□□ -0.04
RPS28-203ENST00000600659 H3F3CQ6NXT2 135 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 ZYG11AQ6WRX3 759 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 RIPOR1Q6ZS17 1223 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 Q6ZS92 163 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 TRABD2AQ86V40 505 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 C4orf33Q8N1A6 199 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 RIBC1Q8N443 379 aaPredicted RBP14.77□□□□□ -0.04
RPS28-203ENST00000600659 SRFBP1Q8NEF9 429 aaKnown RBP14.77□□□□□ -0.04
RPS28-203ENST00000600659 NFAM1Q8NET5 270 aaPredicted RBP14.77□□□□□ -0.04
RPS28-203ENST00000600659 TRPC4APQ8TEL6 797 aa14.77□□□□□ -0.04
RPS28-203ENST00000600659 PTCHD1Q96NR3 888 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms