RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 UROSP10746 265 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 RNH1P13489 461 aaKnown RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 ARRB2P32121 409 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 ARL1P40616 181 aaPredicted RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 CCR10P46092 362 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 FOXA1P55317 472 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 WDR4P57081 412 aaKnown RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 CSTF3Q12996 717 aaKnown RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 DDX39BQ13838 428 aaKnown RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 RCN2Q14257 317 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 AP5B1Q2VPB7 878 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 TTC19Q6DKK2 380 aaPredicted RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 MRM1Q6IN84 353 aaKnown RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 ATG14Q6ZNE5 492 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 TRIM46Q7Z4K8 759 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 PPP1R32Q7Z5V6 425 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 NUDCD3Q8IVD9 361 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 METTL4Q8N3J2 472 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 ACOT4Q8N9L9 421 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 TTC9Q92623 222 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 TBC1D20Q96BZ9 403 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 C11orf24Q96F05 449 aaPredicted RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 WBP1Q96G27 269 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 ATP6V1G3Q96LB4 118 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 CRB3Q9BUF7 120 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 SOX17Q9H6I2 414 aaPredicted RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 TNFRSF12AQ9NP84 129 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 KCNK9Q9NPC2 374 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 FARSBQ9NSD9 589 aaKnown RBP13.78□□□□□ -0.2
LTBP4-228ENST00000600499 SIRT5Q9NXA8 310 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 HCN3Q9P1Z3 774 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 HS3ST3B1Q9Y662 390 aa13.78□□□□□ -0.2
LTBP4-228ENST00000600499 A0A0A6YYD5 115 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 BLACEA4D250 179 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 CDC14CA4D256 554 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 ZNF860A6NHJ4 632 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 CYR61O00622 381 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 CERS1P27544 350 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 HMOX2P30519 316 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 EMP2P54851 167 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 LIM2P55344 173 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 SOX8P57073 446 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 RAB38P57729 211 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 FOXL2P58012 376 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 RHAGQ02094 409 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 TBL3Q12788 808 aaKnown RBP13.77□□□□□ -0.21
LTBP4-228ENST00000600499 ITPR1Q14643 2758 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 TTMPQ5BVD1 217 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 ARL13AQ5H913 290 aaPredicted RBP13.77□□□□□ -0.21
LTBP4-228ENST00000600499 ATP1A1-AS1Q5TC04 95 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 CES4AQ5XG92 561 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 QSOX2Q6ZRP7 698 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 MRGPREQ86SM8 312 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 CUZD1Q86UP6 607 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 PEX11GQ96HA9 241 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 KCNA7Q96RP8 456 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 VN1R1Q9GZP7 353 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 EML4Q9HC35 981 aaKnown RBP13.77□□□□□ -0.21
LTBP4-228ENST00000600499 WDR70Q9NW82 654 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 ZNF446Q9NWS9 450 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 VPS29Q9UBQ0 182 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 C3orf18Q9UK00 162 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 KCNMB2Q9Y691 235 aa13.77□□□□□ -0.21
LTBP4-228ENST00000600499 IGKV3D-11A0A0A0MRZ8 115 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 A0A0G2JN53 185 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 HMGB1P1B2RPK0 211 aaPredicted RBP13.76□□□□□ -0.21
LTBP4-228ENST00000600499 TMEM114B3SHH9 223 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 RTCAO00442 366 aaKnown RBP13.76□□□□□ -0.21
LTBP4-228ENST00000600499 AZIN1O14977 448 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 ALOX12BO75342 701 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 JRKO75564 520 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 SERPINE1P05121 402 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 JAK1P23458 1154 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 GRK2P25098 689 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 HTR6P50406 440 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 OLR1P78380 273 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 ABRAXAS2Q15018 415 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 TBR1Q16650 682 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 UGT3A2Q3SY77 523 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 TCHHL1Q5QJ38 904 aaPredicted RBP13.76□□□□□ -0.21
LTBP4-228ENST00000600499 KIRREL2Q6UWL6 708 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 SCUBE1Q8IWY4 988 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 CLYBLQ8N0X4 340 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 TMEM102Q8N9M5 508 aaPredicted RBP13.76□□□□□ -0.21
LTBP4-228ENST00000600499 CHTF18Q8WVB6 975 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 ZBTB9Q96C00 473 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 MTFMTQ96DP5 389 aaKnown RBP13.76□□□□□ -0.21
LTBP4-228ENST00000600499 METTL2AQ96IZ6 378 aaKnown RBP13.76□□□□□ -0.21
LTBP4-228ENST00000600499 VPS50Q96JG6 964 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 COPS7BQ9H9Q2 264 aaPredicted RBP13.76□□□□□ -0.21
LTBP4-228ENST00000600499 MS4A12Q9NXJ0 267 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 AHSPQ9NZD4 102 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 HAO1Q9UJM8 370 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 MKL2Q9ULH7 1088 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 MMACHCQ9Y4U1 282 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 CCL27Q9Y4X3 112 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 CLDN16Q9Y5I7 305 aa13.76□□□□□ -0.21
LTBP4-228ENST00000600499 MED13Q9UHV7 2174 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms