RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CCDC189A1A4V9 331 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 FCHO1O14526 889 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 PRAMEF4O60810 478 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 ZG16O60844 167 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 TBX6O95947 436 aaPredicted RBP14.78□□□□□ -0.04
VRK3-221ENST00000600284 COL8A1P27658 744 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 TPP2P29144 1249 aaPredicted RBP14.78□□□□□ -0.04
VRK3-221ENST00000600284 KCNC1P48547 511 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 CYB561P49447 251 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 CLCN2P51788 898 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 MTTPP55157 894 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 GUCY2DQ02846 1103 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 PRAMEF9Q5VWM5 478 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 C1QL3Q5VWW1 255 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 ABHD17CQ6PCB6 329 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 ZDHHC24Q6UX98 284 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 RAPH1Q70E73 1250 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 VN1R5Q7Z5H4 357 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 TBC1D1Q86TI0 1168 aaPredicted RBP14.78□□□□□ -0.04
VRK3-221ENST00000600284 CCDC25Q86WR0 208 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 KIF2BQ8N4N8 673 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 APCDD1LQ8NCL9 501 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 FBF1Q8TES7 1133 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 UBE2E3Q969T4 207 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 ESAMQ96AP7 390 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 DEFB126Q9BYW3 111 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 KLHL1Q9NR64 748 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 PRTFDC1Q9NRG1 225 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 NUDT4Q9NZJ9 180 aa14.78□□□□□ -0.04
VRK3-221ENST00000600284 SUCOQ9UBS9 1254 aaKnown RBP14.78□□□□□ -0.04
VRK3-221ENST00000600284 CCNT2O60583 730 aaKnown RBP14.77□□□□□ -0.05
VRK3-221ENST00000600284 LTA4HP09960 611 aaKnown RBP14.77□□□□□ -0.05
VRK3-221ENST00000600284 SLC35E2BP0CK96 405 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 TFEBP19484 476 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 CD22P20273 847 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 SERPINB1P30740 379 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 CA7P43166 264 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 HLCSP50747 726 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 PLA2G16P53816 162 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 CASP6P55212 293 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 PMP22Q01453 160 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 ALDH6A1Q02252 535 aaKnown RBP14.77□□□□□ -0.05
VRK3-221ENST00000600284 IRF8Q02556 426 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 CKAP4Q07065 602 aaKnown RBP14.77□□□□□ -0.05
VRK3-221ENST00000600284 CHIT1Q13231 466 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 SLMAPQ14BN4 828 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 EFTUD2Q15029 972 aaKnown RBP eCLIP14.77□□□□□ -0.05
VRK3-221ENST00000600284 FBXO48Q5FWF7 155 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 GALNTL5Q7Z4T8 443 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 C7orf57Q8NEG2 295 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 TMEM125Q96AQ2 219 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 GPR137Q96N19 417 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 ATOH8Q96SQ7 321 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 TBCDQ9BTW9 1192 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 HES7Q9BYE0 225 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 ALG9Q9H6U8 611 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 COPS7BQ9H9Q2 264 aaPredicted RBP14.77□□□□□ -0.05
VRK3-221ENST00000600284 DAPP1Q9UN19 280 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 ACOT9Q9Y305 439 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 CLDN16Q9Y5I7 305 aa14.77□□□□□ -0.05
VRK3-221ENST00000600284 DIDO1Q9BTC0 2240 aaKnown RBP14.76□□□□□ -0.05
VRK3-221ENST00000600284 TRGV8A0A0C4DH27 118 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 A0A0G2JN53 185 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 SYCE1LA8MT33 242 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 A8MUA0 341 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 CYR61O00622 381 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 NME2P1O60361 137 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 CTNSO60931 367 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 KERAO60938 352 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 SLC25A12O75746 678 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 FAM155BO75949 473 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 MYO1DO94832 1006 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 EPORP19235 508 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 NME2P22392 152 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 LIM2P55344 173 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 DLG1Q12959 904 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 SLC13A2Q13183 592 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 TRADDQ15628 312 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 MAPKAPK3Q16644 382 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 TMEM35AQ53FP2 167 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 ZNF468Q5VIY5 522 aaPredicted RBP14.76□□□□□ -0.05
VRK3-221ENST00000600284 ZNF787Q6DD87 383 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 CMC1Q7Z7K0 106 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 LAS2Q8IYD9 372 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 RHEBL1Q8TAI7 183 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 UBTD2Q8WUN7 234 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 VMP1Q96GC9 406 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 FRMD6Q96NE9 622 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 KCNC2Q96PR1 638 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 LYRM4Q9HD34 91 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 PRDM7Q9NQW5 492 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 PNO1Q9NRX1 252 aaKnown RBP14.76□□□□□ -0.05
VRK3-221ENST00000600284 IGSF5Q9NSI5 407 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 ADGRE2Q9UHX3 823 aa14.76□□□□□ -0.05
VRK3-221ENST00000600284 A0A087X1B8 175 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 K7EPI3 171 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 CCL21O00585 134 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 SLC19A2O60779 497 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 GPR143P51810 404 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 ART3Q13508 389 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms