RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 GIMAP2Q9UG22 337 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 MCM8Q9UJA3 840 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 ADAM21Q9UKJ8 722 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 TMED5Q9Y3A6 229 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 AK5Q9Y6K8 562 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 MAU2Q9Y6X3 613 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 SPTBP11277 2137 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 GMNCA6NCL1 334 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 STMND1H3BQB6 276 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 CHST10O43529 356 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 RAD1O60671 282 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 SHOX2O60902 331 aaPredicted RBP11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 PEX11AO75192 247 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 SEC22BO75396 215 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 KLK3P07288 261 aaPredicted RBP11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 AGXTP21549 392 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 DRD4P21917 467 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 EPHA3P29320 983 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 TIA1P31483 386 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 AQP5P55064 265 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 RPL38P63173 70 aaKnown RBP11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 OLR1P78380 273 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 MAT1AQ00266 395 aaKnown RBP11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 EMX2Q04743 252 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 GALNTL6Q49A17 601 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 ATP6AP1LQ52LC2 224 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 ARHGAP40Q5TG30 622 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 OGFOD2Q6N063 350 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 NOXRED1Q6NXP6 359 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 OVCH1Q7RTY7 1134 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 CA13Q8N1Q1 262 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 ESX1Q8N693 406 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 RFWD2Q8NHY2 731 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 FKBP10Q96AY3 582 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 PPP1R36Q96LQ0 422 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 OR52B2Q96RD2 323 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 EBF4Q9BQW3 602 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 TRIM55Q9BYV6 548 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 CHST8Q9H2A9 424 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 SLC26A1Q9H2B4 701 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 COPS7BQ9H9Q2 264 aaPredicted RBP11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 LYRM4Q9HD34 91 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 NPHS2Q9NP85 383 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 ASIC5Q9NY37 505 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 DKK4Q9UBT3 224 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 PADI1Q9ULC6 663 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 DAPP1Q9UN19 280 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 MAP4K5Q9Y4K4 846 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 ASB4Q9Y574 426 aa11.96□□□□□ -0.49
CHMP2A-206ENST00000600118 NCOR2Q9Y618 2525 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 MED19A0JLT2 244 aaPredicted RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 VSTM2BA6NLU5 285 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 SRRM3A6NNA2 597 aaPredicted RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 TERTO14746 1132 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 PCDH7O60245 1069 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 DIAPH2O60879 1101 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 ALBP02768 609 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 GBAP04062 536 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 FAM58BPP0C7Q3 252 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 TROVE2P10155 538 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 PIM1P11309 404 aaPredicted RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 LBPP18428 481 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 FBLP22087 321 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 STAT5AP42229 794 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 LIM2P55344 173 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 HNRNPH2P55795 449 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 RAB38P57729 211 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 TRA2BP62995 288 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 ERVK-8P63133 956 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 SLAMF1Q13291 335 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 SLC9A5Q14940 896 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 SYT16Q17RD7 645 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 CCNYL2Q5T2Q4 361 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 MRPL14Q6P1L8 145 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 ERMP1Q7Z2K6 904 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 ZC3H7AQ8IWR0 971 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 NLGN4XQ8N0W4 816 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 NLGN4YQ8NFZ3 816 aaPredicted RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 OR51Q1Q8NH59 317 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 GATA6Q92908 595 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 MR1Q95460 341 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 COL26A1Q96A83 441 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 TM4SF18Q96CE8 201 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 THOC1Q96FV9 657 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 MAPKAP1Q9BPZ7 522 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 FAM117AQ9C073 453 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 TGIF2Q9GZN2 237 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 LYARQ9NX58 379 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 HCN3Q9P1Z3 774 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 TRPC4Q9UBN4 977 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 CTSFQ9UBX1 484 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 DCTN4Q9UJW0 460 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 ANGPTL2Q9UKU9 493 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 DLGAP4Q9Y2H0 992 aa11.95□□□□□ -0.5
CHMP2A-206ENST00000600118 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
CHMP2A-206ENST00000600118 A0A1W2PR48 441 aa11.94□□□□□ -0.5
CHMP2A-206ENST00000600118 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms