RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ADGRE2Q9UHX3 823 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TEKT2Q9UIF3 430 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TMCO1Q9UM00 188 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 NTNG1Q9Y2I2 539 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 COPG1Q9Y678 874 aaKnown RBP12.25□□□□□ -0.45
USE1-207ENST00000596136 USP9YO00507 2555 aaPredicted RBP12.25□□□□□ -0.45
USE1-207ENST00000596136 A0A0G2JN53 185 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 LRRC14BA6NHZ5 514 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 TRIM49D1C9J1S8 452 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 POC1B-GALNT4F8VUJ3 575 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 CYR61O00622 381 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 E2F3O00716 465 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 CDK2AP1O14519 115 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 B3GALT2O43825 422 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 SVILO95425 2214 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 CBX6O95503 412 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 WDPCPO95876 746 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 SNRPAP09012 282 aaKnown RBP12.24□□□□□ -0.45
USE1-207ENST00000596136 FAM153BP0C7A2 387 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 RHOXF2BP0C7M4 288 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 GFAPP14136 432 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 GNLYP22749 145 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 PIK3CBP42338 1070 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 UQCRFS1P47985 274 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 PIK3CGP48736 1102 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 ARFIP1P53367 373 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 PLA2G16P53816 162 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 MTTPP55157 894 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 LIM2P55344 173 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 HSD17B7P56937 341 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 RAB38P57729 211 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 SLC26A5P58743 744 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 ACTN3Q08043 901 aaPredicted RBP12.24□□□□□ -0.45
USE1-207ENST00000596136 TGM3Q08188 693 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 UBAP2LQ14157 1087 aaKnown RBP12.24□□□□□ -0.45
USE1-207ENST00000596136 TERF2Q15554 542 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 FAM153CQ494X1 144 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 DEPDC1Q5TB30 811 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 ZNF595Q8IYB9 648 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 LGI4Q8N135 537 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 L3MBTL4Q8NA19 623 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 NFAM1Q8NET5 270 aaPredicted RBP12.24□□□□□ -0.45
USE1-207ENST00000596136 UHMK1Q8TAS1 419 aaKnown RBP12.24□□□□□ -0.45
USE1-207ENST00000596136 ZNF354BQ96LW1 612 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 KCNC2Q96PR1 638 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 NPAS2Q99743 824 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 RHOXF2Q9BQY4 288 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 TBCDQ9BTW9 1192 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 SLC29A3Q9BZD2 475 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 ROGDIQ9GZN7 287 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 EPB41L4BQ9H329 900 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 PLA2G3Q9NZ20 509 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 STMN3Q9NZ72 180 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
USE1-207ENST00000596136 PPIEQ9UNP9 301 aaKnown RBP12.24□□□□□ -0.45
USE1-207ENST00000596136 TRAV17A0A0B4J275 112 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 EXOC1LA0A1B0GW35 172 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 SYNDIG1LA6NDD5 238 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 SAGE2PA6NJ88 616 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 H0YIV9 168 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 STX16-NPEPL1H3BU86 382 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 STX16O14662 325 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 SIX3O95343 332 aaPredicted RBP12.23□□□□□ -0.45
USE1-207ENST00000596136 SBK3P0C264 359 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 MAOAP21397 527 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 ATP5A1P25705 553 aaKnown RBP12.23□□□□□ -0.45
USE1-207ENST00000596136 ARG2P78540 354 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 GTF2H2Q13888 395 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 INAQ16352 499 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 ACER2Q5QJU3 275 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 ABHD17BQ5VST6 288 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 GTF2H2CQ6P1K8 395 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 ZNF793Q6ZN11 406 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 CHSY3Q70JA7 882 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 ARMC10Q8N2F6 343 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 FAM26EQ8N5C1 309 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 LRRN4CLQ8ND94 238 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 TMEM52Q8NDY8 209 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 ARMC2Q8NEN0 867 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 OR1N1Q8NGS0 311 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 MTBPQ96DY7 904 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 CMTM7Q96FZ5 175 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 MRPL57Q9BQC6 102 aaKnown RBP12.23□□□□□ -0.45
USE1-207ENST00000596136 IPPKQ9H8X2 491 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 KCNK13Q9HB14 408 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 LYRM4Q9HD34 91 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 CPSF2Q9P2I0 782 aaKnown RBP12.23□□□□□ -0.45
USE1-207ENST00000596136 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 PCDHGB6Q9Y5F9 930 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 PCDHGA11Q9Y5H2 935 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 SPTAN1Q13813 2472 aaKnown RBP12.23□□□□□ -0.45
USE1-207ENST00000596136 ZGRF1Q86YA3 2104 aa12.23□□□□□ -0.45
USE1-207ENST00000596136 OR5H15A6NDH6 313 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 A8MUI8 341 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 TGFBR3LH3BV60 316 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 CLDN4O14493 209 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 CTNSO60931 367 aa12.22□□□□□ -0.45
USE1-207ENST00000596136 HIST1H1TP22492 207 aaPredicted RBP12.22□□□□□ -0.45
USE1-207ENST00000596136 CERS1P27544 350 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms