RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 IQANK1A0A1B0GTG1 560 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 OR2W5A6NFC9 320 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 SUPT3HB4E1H0 165 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 TRIM49D1C9J1S8 452 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 CLGNO14967 610 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 TAPBPO15533 448 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 OR1F1O43749 312 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 SUPT3HO75486 399 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 RBP1P09455 135 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 SLC35G6P0C7Q6 338 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 CD46P15529 392 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 EEF1DP29692 281 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 SMSP52788 366 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 RHAGQ02094 409 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 CATSPEREQ5SY80 951 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 PAPD4Q6PIY7 484 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 SPPL2CQ8IUH8 684 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 GSPT2Q8IYD1 628 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 TMEM178AQ8NBL3 297 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 ADAMTS18Q8TE60 1221 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 EXT2Q93063 718 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 LURAP1Q96LR2 239 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 FRMD6Q96NE9 622 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 ATOH8Q96SQ7 321 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 LPAR4Q99677 370 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 TRIM8Q9BZR9 551 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 CD244Q9BZW8 370 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 PPCSQ9HAB8 311 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 LANCL2Q9NS86 450 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 TINAGQ9UJW2 476 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 NAALAD2Q9Y3Q0 740 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 APCP25054 2843 aa16.47■□□□□ 0.23
SHKBP1-203ENST00000594298 OTOGQ6ZRI0 2925 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 HEATR5BQ9P2D3 2071 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 FEZF1A0PJY2 475 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 MAGEB17A8MXT2 336 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 LCMT2O60294 686 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 RDH16O75452 317 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 C1GALT1C1LP0DN25 315 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 ESRRAP11474 423 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 AHRP35869 848 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 GDF5P43026 501 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 MAGEA12P43365 314 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 KCNC1P48547 511 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 HSPA7P48741 367 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 IRF9Q00978 393 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 ALDH6A1Q02252 535 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 PWP1Q13610 501 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 ABRAXAS2Q15018 415 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 NSDHLQ15738 373 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 C18orf21Q32NC0 220 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 SFT2D3Q587I9 215 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 SPINK14Q6IE38 97 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 TIFABQ6ZNK6 161 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 LRRC70Q7Z2Q7 622 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 TMPRSS11BQ86T26 416 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 KRT78Q8N1N4 520 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 AFAP1L2Q8N4X5 818 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 HORMAD2Q8N7B1 307 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 SNX31Q8N9S9 440 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 TRPV3Q8NET8 790 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 ZCCHC10Q8TBK6 192 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 UBLCP1Q8WVY7 318 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 HES7Q9BYE0 225 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 PITHD1Q9GZP4 211 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 ANKZF1Q9H8Y5 726 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 KLHL1Q9NR64 748 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 ANKRD10Q9NXR5 420 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 ZFP69BQ9UJL9 534 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 TMCO1Q9UM00 188 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 MEMO1Q9Y316 297 aa16.46■□□□□ 0.23
SHKBP1-203ENST00000594298 GABRR3A8MPY1 467 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 MAN1A2O60476 641 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 CCNT2O60583 730 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 NEURL1O76050 574 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 GFAPP14136 432 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 GMPRP36959 345 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 TAS2R50P59544 299 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 REEP5Q00765 189 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 MEF2AQ02078 507 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 ACTN3Q08043 901 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 RGS1Q08116 209 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 HERC3Q15034 1050 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 RBBP5Q15291 538 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 PDK4Q16654 411 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 NIPAL1Q6NVV3 410 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 SIAH3Q8IW03 269 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 FAM98AQ8NCA5 519 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 TTLQ8NG68 377 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 PEX11GQ96HA9 241 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 TMEM79Q9BSE2 394 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 EHD1Q9H4M9 534 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 PSMC3IPQ9P2W1 217 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 OPTCQ9UBM4 332 aa16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 TNPO3Q9Y5L0 923 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-203ENST00000594298 URADA6NGE7 173 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 NPIPA5E9PKD4 350 aa16.44■□□□□ 0.22
SHKBP1-203ENST00000594298 FAM227AF5H4B4 570 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms