RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ACTL8Q9H568 366 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 NT5DC2Q9H857 520 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 MARCOQ9UEW3 520 aaPredicted RBP18.62■□□□□ 0.57
LSM4-203ENST00000593829 CDC14AQ9UNH5 594 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 NDUFS4O43181 175 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 ONECUT2O95948 504 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 SERPIND1P05546 499 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 CD63P08962 238 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 KITP10721 976 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 CASP2P42575 452 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 OR1D4P47884 311 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 PCDH1Q08174 1060 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 LAPTM5Q13571 262 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 GTF2H2Q13888 395 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 FAM53BQ14153 422 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 SLC9A5Q14940 896 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 PAGE2BQ5JRK9 111 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 TMEM214Q6NUQ4 689 aaKnown RBP18.62■□□□□ 0.57
LSM4-203ENST00000593829 GTF2H2CQ6P1K8 395 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 RNF111Q6ZNA4 994 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 DTWD1Q8N5C7 304 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 METTL27Q8N6F8 245 aaPredicted RBP18.62■□□□□ 0.57
LSM4-203ENST00000593829 TRPV3Q8NET8 790 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 TTLQ8NG68 377 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 DRC3Q9H069 523 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 ZNF304Q9HCX3 659 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 COPG2Q9UBF2 871 aa18.62■□□□□ 0.57
LSM4-203ENST00000593829 E2F3O00716 465 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 SLC1A6P48664 564 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 RGS1Q08116 209 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 HIST2H2ACQ16777 129 aaPredicted RBP18.61■□□□□ 0.57
LSM4-203ENST00000593829 SFT2D3Q587I9 215 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 HIST2H2AA3Q6FI13 130 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 GOLGA7Q7Z5G4 137 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 KCT2Q8NC54 265 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 PPP1R14CQ8TAE6 165 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 NT5CQ8TCD5 201 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.61■□□□□ 0.57
LSM4-203ENST00000593829 SLC22A11Q9NSA0 550 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 EMCNQ9ULC0 261 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 MAU2Q9Y6X3 613 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 A8MT66 165 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 PLIN3O60664 434 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 CREG1O75629 220 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 GSTM2P28161 218 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 SLC25A3Q00325 362 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 E2F2Q14209 437 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 GPR155Q7Z3F1 870 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 COL26A1Q96A83 441 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 MOCOSQ96EN8 888 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 TCFL5Q9UL49 500 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 PADI2Q9Y2J8 665 aa18.61■□□□□ 0.57
LSM4-203ENST00000593829 NKX2-8O15522 239 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 FOXS1O43638 330 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 CD22P20273 847 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 ATP5F1P24539 256 aaPredicted RBP18.6■□□□□ 0.57
LSM4-203ENST00000593829 RPS18P62269 152 aaKnown RBP18.6■□□□□ 0.57
LSM4-203ENST00000593829 CYP4F2P78329 520 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 NFKB2Q00653 900 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 CCDC153Q494R4 210 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 CRTC2Q53ET0 693 aaPredicted RBP18.6■□□□□ 0.57
LSM4-203ENST00000593829 OVCH1Q7RTY7 1134 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 SYVN1Q86TM6 617 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 RNF217Q8TC41 542 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 FKBP10Q96AY3 582 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 IPPKQ9H8X2 491 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 MRPS2Q9Y399 296 aaKnown RBP18.6■□□□□ 0.57
LSM4-203ENST00000593829 SLC22A7Q9Y694 548 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 SEC16AO15027 2179 aa18.6■□□□□ 0.57
LSM4-203ENST00000593829 KMT2BQ9UMN6 2715 aaPredicted RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 PTPRQQ9UMZ3 2332 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 A0A0A6YYC8 382 aaPredicted RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 I3L1I5 382 aaPredicted RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 DLX3O60479 287 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 RECKO95980 971 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 ALBP02768 609 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 AVPR1BP47901 424 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 IDH3AP50213 366 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 MRPL14Q6P1L8 145 aaKnown RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 ZCCHC10Q8TBK6 192 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 PPP4R1Q8TF05 950 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 UBE2E3Q969T4 207 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 MMABQ96EY8 250 aaPredicted RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 ACTR8Q9H981 624 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 PCTPQ9UKL6 214 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 ZNF490Q9ULM2 529 aaPredicted RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 ANKDD1BA6NHY2 528 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 ZNF195O14628 629 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 ITM2AO43736 263 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 RPS17P08708 135 aaKnown RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 FBLP22087 321 aaKnown RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 DSG2Q14126 1118 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 PCLAFQ15004 111 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 OGFRL1Q5TC84 451 aaPredicted RBP18.59■□□□□ 0.57
LSM4-203ENST00000593829 LIPJQ5W064 366 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 UGT2A3Q6UWM9 527 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 ZCCHC23Q6ZST2 131 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 COX15Q7KZN9 410 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 SLC22A9Q8IVM8 553 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 CREB3L4Q8TEY5 395 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms