RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 RP1L1Q8IWN7 2480 aaPredicted RBP25.55■■□□□ 1.68
SMAD4-213ENST00000591914 UGDHO60701 494 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 UQCRHP07919 91 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 PCNAP12004 261 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 CERS1P27544 350 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 RAB38P57729 211 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 SLC26A5P58743 744 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 ARG2P78540 354 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 GTF2H2Q13888 395 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 SLC29A2Q14542 456 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 GTF2H2CQ6P1K8 395 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 TIFABQ6ZNK6 161 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 SCUBE1Q8IWY4 988 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 PTGR2Q8N8N7 351 aaPredicted RBP25.55■■□□□ 1.68
SMAD4-213ENST00000591914 SRFBP1Q8NEF9 429 aaKnown RBP25.55■■□□□ 1.68
SMAD4-213ENST00000591914 MTBPQ96DY7 904 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 SCYL1Q96KG9 808 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 IPPKQ9H8X2 491 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 ACTR8Q9H981 624 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 COPS7BQ9H9Q2 264 aaPredicted RBP25.55■■□□□ 1.68
SMAD4-213ENST00000591914 PLA2G3Q9NZ20 509 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 MAP10Q9P2G4 905 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 FETUBQ9UGM5 382 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 ADGRE2Q9UHX3 823 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 TEKT2Q9UIF3 430 aa25.55■■□□□ 1.68
SMAD4-213ENST00000591914 CLEC18AA5D8T8 446 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 UQCRFS1P47985 274 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 TNFSF10P50591 281 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 ABHD17BQ5VST6 288 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 CLEC18BQ6UXF7 455 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 GSPT2Q8IYD1 628 aaKnown RBP25.54■■□□□ 1.68
SMAD4-213ENST00000591914 CLEC18CQ8NCF0 446 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 ARMC2Q8NEN0 867 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 CMTM7Q96FZ5 175 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 MRPL57Q9BQC6 102 aaKnown RBP25.54■■□□□ 1.68
SMAD4-213ENST00000591914 TBCDQ9BTW9 1192 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 ROGDIQ9GZN7 287 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 DAPP1Q9UN19 280 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 NTNG1Q9Y2I2 539 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 PCDHGA11Q9Y5H2 935 aa25.54■■□□□ 1.68
SMAD4-213ENST00000591914 COPG1Q9Y678 874 aaKnown RBP25.54■■□□□ 1.68
SMAD4-213ENST00000591914 A8MUI8 341 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 TCP11X1B4DZS4 312 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 STX16-NPEPL1H3BU86 382 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 STX16O14662 325 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 WDPCPO95876 746 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 TGFB1P01137 390 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 MYBL2P10244 700 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 GNLYP22749 145 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 EEF1DP29692 281 aaKnown RBP25.53■■□□□ 1.68
SMAD4-213ENST00000591914 PIK3CBP42338 1070 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 LIM2P55344 173 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 HSD17B7P56937 341 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 ZNF33BQ06732 778 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 KHDRBS2Q5VWX1 349 aaKnown RBP25.53■■□□□ 1.68
SMAD4-213ENST00000591914 ZNF793Q6ZN11 406 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 CHSY3Q70JA7 882 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 MYLK4Q86YV6 388 aaPredicted RBP25.53■■□□□ 1.68
SMAD4-213ENST00000591914 TMEM151AQ8N4L1 468 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 L3MBTL4Q8NA19 623 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 TMEM52Q8NDY8 209 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 HUS1BQ8NHY5 278 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 PHF21BQ96EK2 531 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 SLC29A3Q9BZD2 475 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 MRPL46Q9H2W6 279 aaKnown RBP25.53■■□□□ 1.68
SMAD4-213ENST00000591914 KCNK13Q9HB14 408 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 STMN3Q9NZ72 180 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 CLDN16Q9Y5I7 305 aa25.53■■□□□ 1.68
SMAD4-213ENST00000591914 H0YIV9 168 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 CYR61O00622 381 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 SMIM24O75264 130 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 SCELO95171 688 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 HNRNPFP52597 415 aaKnown RBP25.52■■□□□ 1.68
SMAD4-213ENST00000591914 RPUSD3Q6P087 351 aaKnown RBP25.52■■□□□ 1.68
SMAD4-213ENST00000591914 ZNF595Q8IYB9 648 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 CYP4X1Q8N118 509 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 FAM47BQ8NA70 645 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 OR1N1Q8NGS0 311 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 ELP5Q8TE02 316 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 ZNF354BQ96LW1 612 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 LYRM4Q9HD34 91 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 DMRT3Q9NQL9 472 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 KCMF1Q9P0J7 381 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 PCTPQ9UKL6 214 aa25.52■■□□□ 1.68
SMAD4-213ENST00000591914 MRPS33Q9Y291 106 aaKnown RBP25.52■■□□□ 1.68
SMAD4-213ENST00000591914 FLNBO75369 2602 aaKnown RBP25.51■■□□□ 1.68
SMAD4-213ENST00000591914 TRAV17A0A0B4J275 112 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 SAGE2PA6NJ88 616 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 CLDN4O14493 209 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 OR7A17O14581 309 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 SBK3P0C264 359 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 ATP5A1P25705 553 aaKnown RBP25.51■■□□□ 1.67
SMAD4-213ENST00000591914 ACER2Q5QJU3 275 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 TEX35Q5T0J7 233 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 DEPDC1Q5TB30 811 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 RNF175Q8N4F7 328 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 ACOT4Q8N9L9 421 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 NFAM1Q8NET5 270 aaPredicted RBP25.51■■□□□ 1.67
SMAD4-213ENST00000591914 MAGEB10Q96LZ2 347 aaPredicted RBP25.51■■□□□ 1.67
SMAD4-213ENST00000591914 CSF3RQ99062 836 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms