RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ACTN3Q08043 901 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 DDX39BQ13838 428 aaKnown RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 CPSF6Q16630 551 aaKnown RBP eCLIP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 BTBD16Q32M84 506 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 PLEKHN1Q494U1 663 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 SFT2D3Q587I9 215 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 DEPDC1Q5TB30 811 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 PLAG1Q6DJT9 500 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 IGFL2Q6UWQ7 119 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 ISLR2Q6UXK2 745 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 QSOX2Q6ZRP7 698 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 RPS27LQ71UM5 84 aaKnown RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 UBE3DQ7Z6J8 389 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 TDRPQ86YL5 185 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 RNF175Q8N4F7 328 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 ZADH2Q8N4Q0 377 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 AMER2Q8N7J2 671 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 OR52B6Q8NGF0 335 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 BRIX1Q8TDN6 353 aaKnown RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 PSMF1Q92530 271 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 ATP6V1E2Q96A05 226 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 PNPLA2Q96AD5 504 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 REPS1Q96D71 796 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 PTCHD1Q96NR3 888 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 NSUN5Q96P11 429 aaKnown RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 CDK15Q96Q40 435 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 SERINC2Q96SA4 455 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 WDR77Q9BQA1 342 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 TBCDQ9BTW9 1192 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 NTMT1Q9BV86 223 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 OR51B5Q9H339 312 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 COPS7BQ9H9Q2 264 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 ZBTB26Q9HCK0 441 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 SLAMF7Q9NQ25 335 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 DMRT3Q9NQL9 472 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 PRDM9Q9NQV7 894 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.64□□□□□ -1.039e-7■□□□□ 10
DNMT1-223ENST00000591239 METRNQ9UJH8 293 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 B3GNT3Q9Y2A9 372 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 TSC22D4Q9Y3Q8 395 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 V9GYY5 206 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-223ENST00000591239 SCN2AQ99250 2005 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 FLNCQ14315 2725 aa8.64□□□□□ -1.03
DNMT1-223ENST00000591239 NBASA2RRP1 2371 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 CNTRLQ7Z7A1 2325 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 IGKV3D-11A0A0A0MRZ8 115 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 TCRBV16S1A1N1A0A5B0 115 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 FOXO6A8MYZ6 492 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 FOXE1O00358 373 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 SAP18O00422 153 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 RTCAO00442 366 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 CYR61O00622 381 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 CLDN4O14493 209 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 DLX3O60479 287 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 SORBS2O94875 1100 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 RPS17P08708 135 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 KRT15P19012 456 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 HIST1H1TP22492 207 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ATP5A1P25705 553 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 PTX3P26022 381 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 CERS1P27544 350 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 SSR2P43308 183 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 NEK2P51955 445 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 LIM2P55344 173 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 RAB38P57729 211 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 HERVK_113P63132 956 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 PHEXP78562 749 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 MFAP5Q13361 173 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 RASA2Q15283 850 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ZRSR2Q15696 482 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 IGFBP7Q16270 282 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 EXT1Q16394 746 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 AP5B1Q2VPB7 878 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 CRB2Q5IJ48 1285 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 KHDRBS2Q5VWX1 349 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 WDR93Q6P2C0 686 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 PAPD4Q6PIY7 484 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF793Q6ZN11 406 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 LINC00696Q6ZRV3 163 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 Q6ZS92 163 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 SH2D5Q6ZV89 423 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF595Q8IYB9 648 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 CYP4X1Q8N118 509 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 SIRT6Q8N6T7 355 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ACOT4Q8N9L9 421 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 FAM47BQ8NA70 645 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 Q8NA96 180 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ARMC2Q8NEN0 867 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 WDR20Q8TBZ3 569 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 EPS8L3Q8TE67 593 aaKnown RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF483Q8TF39 744 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 RGMAQ96B86 450 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 LMF1Q96S06 567 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 LPAR4Q99677 370 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 CENPKQ9BS16 269 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 C1QTNF3Q9BXJ4 246 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ERVK-6Q9BXR3 956 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 ROGDIQ9GZN7 287 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 EPS8L2Q9H6S3 715 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 LYRM4Q9HD34 91 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms