RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 CASP9P55211 416 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ABATP80404 500 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 UBXN1Q04323 297 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 LOXL1Q08397 574 aaPredicted RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 TSTA3Q13630 321 aaPredicted RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 SQLEQ14534 574 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 DPCR1Q3MIW9 517 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ANKRD20A4Q4UJ75 823 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 MIDNQ504T8 468 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ANKRD20A2Q5SQ80 823 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ANKRD20A1Q5TYW2 823 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 HECTD2Q5U5R9 776 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ANKRD20A3Q5VUR7 823 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 CDKAL1Q5VV42 579 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 SLC22A10Q63ZE4 541 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 E4F1Q66K89 784 aaPredicted RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ANKRD34AQ69YU3 496 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ZNF704Q6ZNC4 412 aaPredicted RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 CAND1Q86VP6 1230 aaKnown RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 RFX6Q8HWS3 928 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 HSCBQ8IWL3 235 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 RFLNBQ8N5W9 214 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 CAMKVQ8NCB2 501 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 PPFIBP2Q8ND30 876 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 OR10H5Q8NGA6 315 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 LILRB1Q8NHL6 650 aaPredicted RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ZPLD1Q8TCW7 415 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 MAGEC3Q8TD91 643 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 STYXQ8WUJ0 223 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 SKA2Q8WVK7 121 aaPredicted RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 SLC13A3Q8WWT9 602 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 THAP11Q96EK4 314 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 ERGIC2Q96RQ1 377 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 PKP4Q99569 1192 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 SLC30A3Q99726 388 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 CCDC77Q9BR77 488 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 RHNO1Q9BSD3 238 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 C10orf88Q9H8K7 445 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 PRDM9Q9NQV7 894 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 PNO1Q9NRX1 252 aaKnown RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 TMEM184CQ9NVA4 438 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 AIPL1Q9NZN9 384 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 SAMD15Q9P1V8 674 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 GDF2Q9UK05 429 aaPredicted RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 TRHDEQ9UKU6 1024 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 LIPT1Q9Y234 373 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 SLC6A5Q9Y345 797 aa5.89□□□□□ -1.47
DNMT1-222ENST00000590619 YLPM1P49750 1951 aaKnown RBP5.89□□□□□ -1.47
DNMT1-222ENST00000590619 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 MROH6A6NGR9 719 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 FRG2CA6NGY1 282 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 LRRC10BA6NIK2 292 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 LRRC53A6NM62 1247 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 E7ENX8 843 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 C16orf97H3BN30 126 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 UBFD1O14562 309 aaKnown RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 MSTNO14793 375 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 KPNA5O15131 536 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 TRAPPC6AO75865 159 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 CCNDBP1O95273 360 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 THBDP07204 575 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 DANCRP0C864 163 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 MSNP26038 577 aaKnown RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 CPOXP36551 454 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 CD79BP40259 229 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 PNLIPRP1P54315 467 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 RPS15AP62244 130 aaKnown RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 SEMA3AQ14563 771 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 ARHGAP19Q14CB8 494 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 TERF2Q15554 542 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 ZNF791Q3KP31 576 aaPredicted RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 DEFB134Q4QY38 66 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 PIGGQ5H8A4 983 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 NHSL2Q5HYW2 709 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 DCST1Q5T197 706 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 BZW1Q7L1Q6 419 aaKnown RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 MILR1Q7Z6M3 343 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 KIAA1328Q86T90 577 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 ASPGQ86U10 573 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 VSIG1Q86XK7 387 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 LRRC56Q8IYG6 542 aaPredicted RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 PLD6Q8N2A8 252 aaKnown RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 AKAP1Q92667 903 aaKnown RBP eCLIP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 STARD4Q96DR4 205 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 PDLIM2Q96JY6 352 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 JSRP1Q96MG2 331 aaPredicted RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 FAM111AQ96PZ2 611 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 EBNA1BP2Q99848 306 aaKnown RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 TMEM204Q9BSN7 226 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 UGT2B28Q9BY64 529 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 ZNF696Q9H7X3 374 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 ABCF3Q9NUQ8 709 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 MYO6Q9UM54 1294 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 AAR2Q9Y312 384 aaKnown RBP5.88□□□□□ -1.47
DNMT1-222ENST00000590619 CLDN16Q9Y5I7 305 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 MRFAP1Q9Y605 127 aa5.88□□□□□ -1.47
DNMT1-222ENST00000590619 NINQ8N4C6 2090 aa5.87□□□□□ -1.47
DNMT1-222ENST00000590619 FREM3P0C091 2139 aa5.87□□□□□ -1.47
DNMT1-222ENST00000590619 DOCK7Q96N67 2140 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms