RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TNPO3Q9Y5L0 923 aaKnown RBP17.11■□□□□ 0.33
DDX39A-212ENST00000590260 SHANK1Q9Y566 2161 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 H0YIV9 168 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 MAN1A2O60476 641 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 DLX3O60479 287 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 PRMT3O60678 531 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 SCELO95171 688 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 PYGBP11216 843 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 TSPAN8P19075 237 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 HSD17B3P37058 310 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 NEK2P51955 445 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 RAB38P57729 211 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 RPS13P62277 151 aaKnown RBP17.1■□□□□ 0.33
DDX39A-212ENST00000590260 SKP1P63208 163 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 DEPDC1Q5TB30 811 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 KHDRBS2Q5VWX1 349 aaKnown RBP17.1■□□□□ 0.33
DDX39A-212ENST00000590260 TRIM40Q6P9F5 258 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 ISLR2Q6UXK2 745 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 RIPOR1Q6ZS17 1223 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 FAM47BQ8NA70 645 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 CATSPER1Q8NEC5 780 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 NFAM1Q8NET5 270 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-212ENST00000590260 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
DDX39A-212ENST00000590260 PPP4R1Q8TF05 950 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 UBLCP1Q8WVY7 318 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-212ENST00000590260 C19orf60Q96EN9 201 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 FAR2Q96K12 515 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 MTERF1Q99551 399 aaKnown RBP17.1■□□□□ 0.33
DDX39A-212ENST00000590260 MAPKAP1Q9BPZ7 522 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 C1QTNF3Q9BXJ4 246 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 ACTR8Q9H981 624 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.33
DDX39A-212ENST00000590260 DAPP1Q9UN19 280 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 B3GNT3Q9Y2A9 372 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 ANGPTL3Q9Y5C1 460 aa17.1■□□□□ 0.33
DDX39A-212ENST00000590260 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-212ENST00000590260 IQANK1A0A1B0GTG1 560 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 PLPP1O14494 284 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 UGDHO60701 494 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 SMIM24O75264 130 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 JAK1P23458 1154 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 ATP5A1P25705 553 aaKnown RBP17.09■□□□□ 0.33
DDX39A-212ENST00000590260 PPP2R1BP30154 601 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 SLCO1A2P46721 670 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 MTTPP55157 894 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 CDH13P55290 713 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 OR4D2P58180 307 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 SLC26A5P58743 744 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 DDX39BQ13838 428 aaKnown RBP17.09■□□□□ 0.33
DDX39A-212ENST00000590260 ZRSR2Q15696 482 aaKnown RBP17.09■□□□□ 0.33
DDX39A-212ENST00000590260 INPP5JQ15735 1006 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-212ENST00000590260 CPSF6Q16630 551 aaKnown RBP eCLIP17.09■□□□□ 0.33
DDX39A-212ENST00000590260 BTBD16Q32M84 506 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 H3F3CQ6NXT2 135 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 TDRPQ86YL5 185 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 KIF2BQ8N4N8 673 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 ACOT4Q8N9L9 421 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 OR2W6PQ8NHA6 318 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 AENQ8WTP8 325 aaKnown RBP17.09■□□□□ 0.33
DDX39A-212ENST00000590260 UBE2E3Q969T4 207 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 LMF1Q96S06 567 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 NTMT1Q9BV86 223 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 SEMA4BQ9NPR2 832 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-212ENST00000590260 PRDM9Q9NQV7 894 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 PLA2G3Q9NZ20 509 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 C19orf25Q9UFG5 118 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-212ENST00000590260 TMCO1Q9UM00 188 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 PCDHGA10Q9Y5H3 936 aa17.09■□□□□ 0.33
DDX39A-212ENST00000590260 TTLL8A6PVC2 850 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 ESPNB1AK53 854 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 B3GALT2O43825 422 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 KLHL41O60662 606 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 CLDN9O95484 217 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 F10P00742 488 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 PIK3CBP42338 1070 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 ST13P50502 369 aaKnown RBP17.08■□□□□ 0.32
DDX39A-212ENST00000590260 UNC50Q53HI1 259 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 FCRLBQ6BAA4 426 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 LETMD1Q6P1Q0 360 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 MYLK4Q86YV6 388 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-212ENST00000590260 ZADH2Q8N4Q0 377 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 M1APQ8TC57 530 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 CPT1CQ8TCG5 803 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 ACMSDQ8TDX5 336 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.08■□□□□ 0.32
DDX39A-212ENST00000590260 CMTM7Q96FZ5 175 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 KCNC2Q96PR1 638 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 TMEM237Q96Q45 408 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 TBCDQ9BTW9 1192 aa17.08■□□□□ 0.32
DDX39A-212ENST00000590260 C12orf65Q9H3J6 166 aaKnown RBP17.08■□□□□ 0.32
DDX39A-212ENST00000590260 MYOCOSA0A1B0GUC4 107 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 A8MUA0 341 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 G3V2L1 256 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 SLU7O95391 586 aaKnown RBP17.07■□□□□ 0.32
DDX39A-212ENST00000590260 HIST1H1TP22492 207 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-212ENST00000590260 SERPINB1P30740 379 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 BSGP35613 385 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 SRSF1Q07955 248 aaKnown RBP eCLIP17.07■□□□□ 0.324e-8■□□□□ 10.3
DDX39A-212ENST00000590260 TMEM35AQ53FP2 167 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms