RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 EBF4Q9BQW3 602 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 NPLQ9BXD5 320 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 SPRY4Q9C004 299 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 EPN3Q9H201 632 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 CLK4Q9HAZ1 481 aaKnown RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 KCNK13Q9HB14 408 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 ASCL3Q9NQ33 180 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 KLHL14Q9P2G3 628 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 MCM8Q9UJA3 840 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 POLR3HQ9Y535 204 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 AK5Q9Y6K8 562 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 CNOT1A5YKK6 2376 aaKnown RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 GNG14A0A1W2PPG7 69 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 TRABD2BA6NFA1 517 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 BRINP1O60477 761 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 PIM1P11309 404 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 ITGAXP20702 1163 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 FBLP22087 321 aaKnown RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 CD82P27701 267 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 MAPK1P28482 360 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 ERVK-8P63133 956 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 OLR1P78380 273 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 EMX2Q04743 252 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 SF3A3Q12874 501 aaKnown RBP eCLIP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 RUNX2Q13950 521 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 DSG2Q14126 1118 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 SLC9A5Q14940 896 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 LSM12Q3MHD2 195 aaKnown RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 ARHGAP40Q5TG30 622 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 C6orf15Q6UXA7 325 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 OR5T3Q8NGG3 340 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 STON2Q8WXE9 905 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 FCRL1Q96LA6 429 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 ELAC2Q9BQ52 826 aaKnown RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 CCDC28BQ9BUN5 200 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 C1orf50Q9BV19 199 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 TMEM120AQ9BXJ8 343 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 EBPLQ9BY08 206 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 TCF7L2Q9NQB0 619 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 THSD1Q9NS62 852 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 LYARQ9NX58 379 aaKnown RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 HCN3Q9P1Z3 774 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 EIF3LQ9Y262 564 aaKnown RBP14.37□□□□□ -0.11
ATG4D-211ENST00000589753 MSRB2Q9Y3D2 182 aa14.37□□□□□ -0.11
ATG4D-211ENST00000589753 TEX51A0A1B0GUA7 166 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 CHST10O43529 356 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 TMPRSS11DO60235 418 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 DNAJB6O75190 326 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 ONECUT2O95948 504 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 ADRB1P08588 477 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 ANXA4P09525 319 aaPredicted RBP14.36□□□□□ -0.11
ATG4D-211ENST00000589753 FAM58BPP0C7Q3 252 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 CCNYL3P0C7X3 344 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 ACPPP15309 386 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 ARFIP2P53365 341 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 MAPK12P53778 367 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 LIM2P55344 173 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 MAT1AQ00266 395 aaKnown RBP14.36□□□□□ -0.11
ATG4D-211ENST00000589753 MAP7Q14244 749 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 NKAIN1Q4KMZ8 207 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 IL23RQ5VWK5 629 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 MRM1Q6IN84 353 aaKnown RBP14.36□□□□□ -0.11
ATG4D-211ENST00000589753 OGFOD2Q6N063 350 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 SPATA21Q7Z572 469 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 SPATA19Q7Z5L4 167 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 PARP9Q8IXQ6 854 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 CA13Q8N1Q1 262 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 MR1Q95460 341 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 RILPQ96NA2 401 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 RABEP2Q9H5N1 569 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 LYRM4Q9HD34 91 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 NOP53Q9NZM5 478 aaKnown RBP14.36□□□□□ -0.11
ATG4D-211ENST00000589753 DAPP1Q9UN19 280 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 DLGAP4Q9Y2H0 992 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 MAP4K5Q9Y4K4 846 aa14.36□□□□□ -0.11
ATG4D-211ENST00000589753 STMND1H3BQB6 276 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 PRPS2P11908 318 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 RAB38P57729 211 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 TRA2BP62995 288 aaKnown RBP14.35□□□□□ -0.11
ATG4D-211ENST00000589753 ZNF763Q0D2J5 394 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 SYT16Q17RD7 645 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 COX15Q7KZN9 410 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 TIPARPQ7Z3E1 657 aaKnown RBP14.35□□□□□ -0.11
ATG4D-211ENST00000589753 GPR180Q86V85 440 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 NLGN4XQ8N0W4 816 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 LIX1Q8N485 282 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 ESX1Q8N693 406 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 EFCAB3Q8N7B9 438 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 NLGN4YQ8NFZ3 816 aaPredicted RBP14.35□□□□□ -0.11
ATG4D-211ENST00000589753 OR51Q1Q8NH59 317 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 MAPKAP1Q9BPZ7 522 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 YIPF2Q9BWQ6 316 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 AKIRIN1Q9H9L7 192 aaPredicted RBP14.35□□□□□ -0.11
ATG4D-211ENST00000589753 SLC22A11Q9NSA0 550 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 ASIC5Q9NY37 505 aa14.35□□□□□ -0.11
ATG4D-211ENST00000589753 IFT80Q9P2H3 777 aaPredicted RBP14.35□□□□□ -0.11
ATG4D-211ENST00000589753 TRPC4Q9UBN4 977 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms