RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ANGPT1Q15389 498 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 CCDC6Q16204 474 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 HLA-BQ31612 363 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 MRM1Q6IN84 353 aaKnown RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ZCCHC8Q6NZY4 707 aaKnown RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 AAGABQ6PD74 315 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 PTRH1Q86Y79 214 aaKnown RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 OR4N4Q8N0Y3 316 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 MMP21Q8N119 569 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 NATD1Q8N6N6 113 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ACOT4Q8N9L9 421 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 FAM47BQ8NA70 645 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 HIPK4Q8NE63 616 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ZCCHC10Q8TBK6 192 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 SAP25Q8TEE9 199 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 CD180Q99467 661 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 MAP3K3Q99759 626 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 FAIM2Q9BWQ8 316 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 ROGDIQ9GZN7 287 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 PCDHAC1Q9H158 963 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 MUC13Q9H3R2 512 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 IKZF5Q9H5V7 419 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 IL21RQ9HBE5 538 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 FSCN3Q9NQT6 498 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 LYARQ9NX58 379 aaKnown RBP10.84□□□□□ -0.67
SMAD4-205ENST00000588745 EPHA6Q9UF33 1036 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 AP3M1Q9Y2T2 418 aa10.84□□□□□ -0.67
SMAD4-205ENST00000588745 SDK1Q7Z5N4 2213 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 IGHV1OR21-1A0A087WYE8 117 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 NVLO15381 856 aaKnown RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 DUX1O43812 170 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 GUCY1B2O75343 617 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 STAMBPO95630 424 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 SMIM10L1P0DMW3 83 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 DRD2P14416 443 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 EFNA1P20827 205 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 ATP6V1B2P21281 511 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 ZNF10P21506 573 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 AVPR2P30518 371 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 GPR3P46089 330 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 ALDH9A1P49189 494 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 CCT8P50990 548 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 ATXN3P54252 364 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 GPLD1P80108 840 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 SLAMF1Q13291 335 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 FXNQ16595 210 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 PRSS53Q2L4Q9 553 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 MPEG1Q2M385 716 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 ZC3H12BQ5HYM0 836 aaKnown RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 MANEAQ5SRI9 462 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 FAM92BQ6ZTR7 304 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 ABHD13Q7L211 337 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 DGLUCYQ7Z3D6 616 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 IFNEQ86WN2 208 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 GATAD2AQ86YP4 633 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 CSNK1A1LQ8N752 337 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 OR4A15Q8NGL6 344 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 OR4C6Q8NH72 309 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 GOT1L1Q8NHS2 421 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 SLC26A7Q8TE54 656 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 CIDECQ96AQ7 238 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 AURKBQ96GD4 344 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 ZDHHC12Q96GR4 267 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 TCTN2Q96GX1 697 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 SMIM10Q96HG1 83 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 TGM7Q96PF1 710 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 CCDC3Q9BQI4 270 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 THUMPD3Q9BV44 507 aaKnown RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 NLNQ9BYT8 704 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 TRIM15Q9C019 465 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 GAREM1Q9H706 876 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 S100A14Q9HCY8 104 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 FAM60AQ9NP50 221 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 EHD3Q9NZN3 535 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 ZNF282Q9UDV7 671 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-205ENST00000588745 VPS4AQ9UN37 437 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 SLC6A14Q9UN76 642 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 PI4KAP42356 2102 aa10.83□□□□□ -0.68
SMAD4-205ENST00000588745 MUC3AQ02505 3323 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 A0A1W2PRB8 838 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 FAM220BPB1ANY3 271 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 PATE3B3GLJ2 98 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 ARPC2O15144 300 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 PDPK1O15530 556 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 KIF1CO43896 1103 aaKnown RBP10.82□□□□□ -0.68
SMAD4-205ENST00000588745 EPN2O95208 641 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 CER1O95813 267 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 AIFM1O95831 613 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 C6orf47O95873 294 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 EIF2S1P05198 315 aaKnown RBP10.82□□□□□ -0.68
SMAD4-205ENST00000588745 C8BP07358 591 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 ZCCHC18P0CG32 403 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 ALOX12P18054 663 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 HTR1EP28566 365 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 ALDH4A1P30038 563 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 OR1D5P58170 312 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 VSX2P58304 361 aaPredicted RBP10.82□□□□□ -0.68
SMAD4-205ENST00000588745 AP2B1P63010 937 aa10.82□□□□□ -0.68
SMAD4-205ENST00000588745 BTN3A2P78410 334 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms