RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 HIST1H1TP22492 207 aaPredicted RBP17.31■□□□□ 0.36
H3F3B-206ENST00000587560 TIA1P31483 386 aaKnown RBP eCLIP17.31■□□□□ 0.363e-6■■□□□ 11.8
H3F3B-206ENST00000587560 TGM3Q08188 693 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ACSM2AQ08AH3 577 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ATP6AP1LQ52LC2 224 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 C3orf38Q5JPI3 329 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 DCAF12Q5T6F0 453 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ACSM2BQ68CK6 577 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 NIPAL1Q6NVV3 410 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ZNF517Q6ZMY9 492 aaPredicted RBP17.31■□□□□ 0.36
H3F3B-206ENST00000587560 MED25Q71SY5 747 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 TMEM126BQ8IUX1 230 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ACOT4Q8N9L9 421 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 CEP70Q8NHQ1 597 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 PROKR1Q8TCW9 393 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 SLC46A1Q96NT5 459 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 SERINC2Q96SA4 455 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ELAC2Q9BQ52 826 aaKnown RBP17.31■□□□□ 0.36
H3F3B-206ENST00000587560 NDC1Q9BTX1 674 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ASPSCR1Q9BZE9 553 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ROGDIQ9GZN7 287 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 NRSN2Q9GZP1 204 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 NSRP1Q9H0G5 558 aaKnown RBP17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ACTR5Q9H9F9 607 aaPredicted RBP17.31■□□□□ 0.36
H3F3B-206ENST00000587560 SLC22A11Q9NSA0 550 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 KCMF1Q9P0J7 381 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 DHCR7Q9UBM7 475 aaKnown RBP17.31■□□□□ 0.36
H3F3B-206ENST00000587560 MCM8Q9UJA3 840 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 DLGAP4Q9Y2H0 992 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 A0A0G2JN53 185 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 EIF4E1BA6NMX2 242 aaKnown RBP17.3■□□□□ 0.36
H3F3B-206ENST00000587560 CDRT15L2A8MXV6 281 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 NVLO15381 856 aaKnown RBP17.3■□□□□ 0.36
H3F3B-206ENST00000587560 TMPRSS11DO60235 418 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 SEC22BO75396 215 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 DLGAP3O95886 979 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 HBQ1P09105 142 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 LBPP18428 481 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 CERS1P27544 350 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 MRPL19P49406 292 aaKnown RBP17.3■□□□□ 0.36
H3F3B-206ENST00000587560 MTTPP55157 894 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 ERVK-8P63133 956 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 BTN3A2P78410 334 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 RUNX2Q13950 521 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 RTP5Q14D33 572 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 COL28A1Q2UY09 1125 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 DEFB134Q4QY38 66 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 SPDYAQ5MJ70 313 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 NOXRED1Q6NXP6 359 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 TTLL10Q6ZVT0 673 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 SPATA21Q7Z572 469 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 CLNKQ7Z7G1 428 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 NUDT13Q86X67 352 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 SHISA5Q8N114 240 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 OR9A4Q8NGU2 314 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 CENPKQ9BS16 269 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 NPLQ9BXD5 320 aaPredicted RBP17.3■□□□□ 0.36
H3F3B-206ENST00000587560 ZNF385DQ9H6B1 395 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 ASCL3Q9NQ33 180 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 TCF7L2Q9NQB0 619 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 NAALAD2Q9Y3Q0 740 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 ASB4Q9Y574 426 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 PCDHGA7Q9Y5G6 932 aa17.3■□□□□ 0.36
H3F3B-206ENST00000587560 NUP210LQ5VU65 1888 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 A0A0A6YYC8 382 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-206ENST00000587560 A0A0G2JND7 137 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 I3L1I5 382 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-206ENST00000587560 ANKRD28O15084 1053 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 CPNE3O75131 537 aaKnown RBP17.29■□□□□ 0.36
H3F3B-206ENST00000587560 KLK1P06870 262 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 RAP1GDS1P52306 607 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 MAPK10P53779 464 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 RPL38P63173 70 aaKnown RBP17.29■□□□□ 0.36
H3F3B-206ENST00000587560 GALNTL6Q49A17 601 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 PRMT9Q6P2P2 845 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 COX15Q7KZN9 410 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 SPATA19Q7Z5L4 167 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 CPLX4Q7Z7G2 160 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 DSELQ8IZU8 1212 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 ANKHQ9HCJ1 492 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 IRAK4Q9NWZ3 460 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 FOXJ2Q9P0K8 574 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 ACSL6Q9UKU0 697 aa17.29■□□□□ 0.36
H3F3B-206ENST00000587560 SGK494L7N484 410 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 PCDH7O60245 1069 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 KIAA0754O94854 1291 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 TNFSF15O95150 251 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 NTRK1P04629 796 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 BCKDHAP12694 445 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 SDC1P18827 310 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 TACR1P25103 407 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 SSR2P43308 183 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 ARFIP2P53365 341 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 DIO3P55073 304 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 HNRNPH2P55795 449 aaKnown RBP17.28■□□□□ 0.36
H3F3B-206ENST00000587560 TRA2BP62995 288 aaKnown RBP17.28■□□□□ 0.36
H3F3B-206ENST00000587560 GABREP78334 506 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 MAD2L1Q13257 205 aaPredicted RBP17.28■□□□□ 0.36
H3F3B-206ENST00000587560 TMEM198Q66K66 360 aa17.28■□□□□ 0.36
H3F3B-206ENST00000587560 ACAD11Q709F0 780 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms