RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 A0A0G2JN53 185 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 FAM221AA4D161 298 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 USP27XA6NNY8 438 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 NRDCO43847 1150 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 CTAG2O75638 210 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 OR2J2O76002 312 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 GUCA1CO95843 209 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 IGHG3P01860 377 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 TUBB4AP04350 444 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 SERPINA6P08185 405 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 ACVR2AP27037 513 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 HNRNPH1P31943 449 aaKnown RBP11.03□□□□□ -0.64
BRCA1-225ENST00000586385 SOX3P41225 446 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 SSR4P51571 173 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 AP1S2P56377 157 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 SKP1P63208 163 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 BTN3A2P78410 334 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 FOXO1Q12778 655 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 CSHL1Q14406 222 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 PPP1R3AQ16821 1122 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 MSS51Q4VC12 460 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 NIPAL1Q6NVV3 410 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 NXPE4Q6UWF7 544 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 IGDCC3Q8IVU1 814 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 CNTN4Q8IWV2 1026 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 TMEM251Q8N6I4 163 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 ZNF321PQ8N8H1 164 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 OR5M3Q8NGP4 307 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 VMP1Q96GC9 406 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 QRFPRQ96P65 431 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 RASL10BQ96S79 203 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 GSX1Q9H4S2 264 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-225ENST00000586385 PELI2Q9HAT8 420 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 TIMMDC1Q9NPL8 285 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 SEMA4BQ9NPR2 832 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-225ENST00000586385 YARS2Q9Y2Z4 477 aaKnown RBP11.03□□□□□ -0.64
BRCA1-225ENST00000586385 ABCA4P78363 2273 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 MYOCOSA0A1B0GUC4 107 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 A0A1B0GVC2 190 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 PSMD12O00232 456 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 CYR61O00622 381 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 HIST1H2AGP0C0S8 130 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 CCDC175P0C221 793 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 KLK2P20151 261 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 HIST1H2ADP20671 130 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 ENDOUP21128 410 aaKnown RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 MAGEA5P43359 124 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 IL2P60568 153 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 MYBPHQ13203 477 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 ZNF750Q32MQ0 723 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 C18orf21Q32NC0 220 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 RNASEH2BQ5TBB1 312 aaKnown RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 CES4AQ5XG92 561 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 IL20RBQ6UXL0 311 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 ACAD11Q709F0 780 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 TRILQ7L0X0 811 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 VN1R5Q7Z5H4 357 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 TMPRSS11BQ86T26 416 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 THOC6Q86W42 341 aaKnown RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 PALM2Q8IXS6 379 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 TRPV3Q8NET8 790 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 MS4A6EQ96DS6 147 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 MS4A14Q96JA4 679 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 HIST1H2AHQ96KK5 128 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 SMC6Q96SB8 1091 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 CSF3RQ99062 836 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 HIST1H2AJQ99878 128 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 WDR83Q9BRX9 315 aaKnown RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 H2AFJQ9BTM1 129 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 CNPPD1Q9BV87 410 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 LZTFL1Q9NQ48 299 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 HOMER3Q9NSC5 361 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 DNAJB12Q9NXW2 375 aaKnown RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 MYOTQ9UBF9 498 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 SLC22A14Q9Y267 594 aa11.02□□□□□ -0.65
BRCA1-225ENST00000586385 RPH3AQ9Y2J0 694 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-225ENST00000586385 A8MVJ9 347 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 WWP2O00308 870 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 CDC7O00311 574 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 PRAMEF4O60810 478 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ZFAND5O76080 213 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ZWINTO95229 277 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 PGAM1P18669 254 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 CDC25BP30305 580 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 HK2P52789 917 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 HSD17B7P56937 341 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 PLGLB1Q02325 96 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 FOXD4Q12950 439 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-225ENST00000586385 RBBP5Q15291 538 aaKnown RBP11.01□□□□□ -0.65
BRCA1-225ENST00000586385 CYP1B1Q16678 543 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 HECTD2Q5U5R9 776 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 PRAMEF9Q5VWM5 478 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ADNP2Q6IQ32 1131 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ZNF585AQ6P3V2 769 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 B3GNT6Q6ZMB0 384 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 SLCO4C1Q6ZQN7 724 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ZNF662Q6ZS27 426 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 SEM1Q6ZVN7 128 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms