RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 OR5M3Q8NGP4 307 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 ROPN1LQ96C74 230 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 FBXL8Q96CD0 374 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 OR2M4Q96R27 311 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 POLR1BQ9H9Y6 1135 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 TMEM165Q9HC07 324 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 TMEM74BQ9NUR3 256 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 MARK1Q9P0L2 795 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 ACTR3BQ9P1U1 418 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 SUCOQ9UBS9 1254 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 TRPS1Q9UHF7 1281 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 ANGPT4Q9Y264 503 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 NTNG1Q9Y2I2 539 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 ATG4BQ9Y4P1 393 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 MTCH2Q9Y6C9 303 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 APC2O95996 2303 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 LINC00854A0A1B0GVQ3 168 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 DEAF1O75398 565 aaPredicted RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 PSIP1O75475 530 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 IFNA16P05015 189 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 TNNI3P19429 210 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 TIA1P31483 386 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFFL-212ENST00000584655 SLC6A12P48065 614 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 CCR8P51685 355 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 SLC16A1P53985 500 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 FCHO2Q0JRZ9 810 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 OGFOD2Q6N063 350 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 B3GLCTQ6Y288 498 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 TMEM64Q6YI46 380 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 KLHDC8AQ8IYD2 350 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 TMEM102Q8N9M5 508 aaPredicted RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 TMIEQ8NEW7 156 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 RMND5BQ96G75 393 aaPredicted RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 TOR3AQ9H497 397 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 DMRT3Q9NQL9 472 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 VNN3Q9NY84 501 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 CD300AQ9UGN4 299 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 FAM32AQ9Y421 112 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 SGK494L7N484 410 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 M0R3H8 397 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 CBLP22681 906 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 PPP2R1BP30154 601 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 RRM2P31350 389 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 PIGAP37287 484 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 ZFP36L2P47974 494 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 CCR4P51679 360 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 GPR68Q15743 365 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 SYPL1Q16563 259 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 NADK2Q4G0N4 442 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 PDCD4Q53EL6 469 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 NDUFAF5Q5TEU4 345 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 PTCRAQ6ISU1 281 aaPredicted RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 AAGABQ6PD74 315 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 AMIGO1Q86WK6 493 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 RAB42Q8N4Z0 105 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 AVL9Q8NBF6 648 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 CMTM7Q96FZ5 175 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 PDLIM5Q96HC4 596 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 BDH2Q9BUT1 245 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 OR52A5Q9H2C5 316 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 C6orf203Q9P0P8 240 aaPredicted RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 MRPS2Q9Y399 296 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 PRSS51A0A1B0GVH4 220 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 MATN4O95460 622 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 CFIP05156 583 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 PRPS1L1P21108 318 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 MAPK1P28482 360 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 BCL6P41182 706 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 DHPSP49366 369 aaPredicted RBP9.8□□□□□ -0.84
RFFL-212ENST00000584655 CLDN8P56748 225 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 MYBPC1Q00872 1141 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 ZNF763Q0D2J5 394 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 SFSWAPQ12872 951 aaKnown RBP9.8□□□□□ -0.84
RFFL-212ENST00000584655 RPE65Q16518 533 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 CNPY1Q3B7I2 92 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 ZDHHC20Q5W0Z9 365 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 FRMPD2BQ6IN97 320 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 FIGNL1Q6PIW4 674 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 PDZD3Q86UT5 571 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 SMPDL3AQ92484 453 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 PMEPA1Q969W9 287 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 ZG16BQ96DA0 208 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 CNPPD1Q9BV87 410 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 C11orf16Q9NQ32 467 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 CDC14CA4D256 554 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 KLK8O60259 260 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 CBSLP0DN79 551 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 NT5EP21589 574 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 CBSP35520 551 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 GALNT1Q10472 559 aaPredicted RBP9.8□□□□□ -0.84
RFFL-212ENST00000584655 HERC3Q15034 1050 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 DEFB123Q8N688 67 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 FBXO15Q8NCQ5 510 aaPredicted RBP9.8□□□□□ -0.84
RFFL-212ENST00000584655 TSPAN14Q8NG11 270 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.8□□□□□ -0.846e-7■■■■■ 54.5
RFFL-212ENST00000584655 BMFQ96LC9 184 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 NLNQ9BYT8 704 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 SLC7A5P2Q9GIP4 190 aa9.8□□□□□ -0.84
RFFL-212ENST00000584655 NAA50Q9GZZ1 169 aaKnown RBP9.8□□□□□ -0.84
RFFL-212ENST00000584655 SLAMF7Q9NQ25 335 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms