RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 TAS2R50P59544 299 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 COPZ1P61923 177 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 RAB33AQ14088 237 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 MPEG1Q2M385 716 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 LEXMQ3ZCV2 418 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
RNF43-205ENST00000581868 TRIM40Q6P9F5 258 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 SLCO4C1Q6ZQN7 724 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 TMEM25Q86YD3 366 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
RNF43-205ENST00000581868 TAGAPQ8N103 731 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 CPXM2Q8N436 756 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 GEMIN6Q8WXD5 167 aaKnown RBP13.11□□□□□ -0.31
RNF43-205ENST00000581868 CLN6Q9NWW5 311 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 ATP6V1HQ9UI12 483 aa13.11□□□□□ -0.31
RNF43-205ENST00000581868 PNMA8CA0A1B0GUJ8 204 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 H3BM21 787 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 LEFTY2O00292 366 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 CCNKO75909 580 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 TCEA1P23193 301 aaKnown RBP13.1□□□□□ -0.31
RNF43-205ENST00000581868 PIK3CBP42338 1070 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 XCR1P46094 333 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 SLBPQ14493 270 aaKnown RBP eCLIP13.1□□□□□ -0.31
RNF43-205ENST00000581868 PRSS53Q2L4Q9 553 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 KLHL17Q6TDP4 642 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 SLC44A2Q8IWA5 706 aaPredicted RBP13.1□□□□□ -0.31
RNF43-205ENST00000581868 TCEAL8Q8IYN2 117 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 MMP21Q8N119 569 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 OR56A3Q8NH54 315 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 METTL2AQ96IZ6 378 aaKnown RBP13.1□□□□□ -0.31
RNF43-205ENST00000581868 NMNAT1Q9HAN9 279 aaPredicted RBP13.1□□□□□ -0.31
RNF43-205ENST00000581868 THSD1Q9NS62 852 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 MKLN1Q9UL63 735 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 MAPRE3Q9UPY8 281 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 CCRL2O00421 344 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 GRM6O15303 877 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 GPX5O75715 221 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 AP2A2O94973 939 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 KLK1P06870 262 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 RECQLP46063 649 aaPredicted RBP13.1□□□□□ -0.31
RNF43-205ENST00000581868 LIMK1P53667 647 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 CRISP1P54107 249 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 SP3Q02447 781 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 RBBP4Q09028 425 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 SSX1Q16384 188 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 DUSP7Q16829 419 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 TMEM220Q6QAJ8 160 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 RASGRP3Q8IV61 690 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 OXR1Q8N573 874 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
RNF43-205ENST00000581868 RAET1EQ8TD07 263 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 C16orf78Q8WTQ4 265 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 LMLNQ96KR4 655 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 FOPNLQ96NB1 174 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 SDHCQ99643 169 aaPredicted RBP13.1□□□□□ -0.31
RNF43-205ENST00000581868 MTG2Q9H4K7 406 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 FBXL12Q9NXK8 326 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 ABT1Q9ULW3 272 aaKnown RBP13.1□□□□□ -0.31
RNF43-205ENST00000581868 AP1M2Q9Y6Q5 423 aa13.1□□□□□ -0.31
RNF43-205ENST00000581868 LINC00854A0A1B0GVQ3 168 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 PDZK1P1A8MUH7 402 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 NPC1O15118 1278 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 GPR37L1O60883 481 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 ATG13O75143 517 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 ENTPD6O75354 484 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 SOX14O95416 240 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 IGFBP1P08833 259 aaPredicted RBP13.09□□□□□ -0.31
RNF43-205ENST00000581868 FURINP09958 794 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 CBLP22681 906 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 VIPR1P32241 457 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 SOX3P41225 446 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 TBPL1P62380 186 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 IFITM2Q01629 132 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 LRRC74AQ0VAA2 488 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 RPS26P11Q5JNZ5 115 aaPredicted RBP13.09□□□□□ -0.31
RNF43-205ENST00000581868 C6orf183Q5T699 404 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 PLAG1Q6DJT9 500 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 FRMPD2BQ6IN97 320 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 CCDC190Q86UF4 302 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 ATCAYQ86WG3 371 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 IL17RDQ8NFM7 739 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 OR2A12Q8NGT7 310 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 GOT1L1Q8NHS2 421 aaPredicted RBP13.09□□□□□ -0.31
RNF43-205ENST00000581868 C9orf43Q8TAL5 461 aaPredicted RBP13.09□□□□□ -0.31
RNF43-205ENST00000581868 ZNF480Q8WV37 535 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 SORCS1Q8WY21 1168 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 ZNF486Q96H40 463 aaPredicted RBP13.09□□□□□ -0.31
RNF43-205ENST00000581868 WRAP53Q9BUR4 548 aaKnown RBP13.09□□□□□ -0.31
RNF43-205ENST00000581868 SORBS1Q9BX66 1292 aaKnown RBP13.09□□□□□ -0.31
RNF43-205ENST00000581868 CDCA4Q9BXL8 241 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
RNF43-205ENST00000581868 NEK6Q9HC98 313 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 KLHL3Q9UH77 587 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 CFL2Q9Y281 166 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 ENPP4Q9Y6X5 453 aa13.09□□□□□ -0.31
RNF43-205ENST00000581868 A0A1W2PRB8 838 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms