RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ZBED8Q8IZ13 594 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 CD177Q8N6Q3 437 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 CD99L2Q8TCZ2 262 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 EXOC4Q96A65 974 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 TSSK2Q96PF2 358 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 TNFRSF13CQ96RJ3 184 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 UBQLN3Q9H347 655 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 LMAN1LQ9HAT1 526 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 PLEKHA3Q9HB20 300 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 ZNF581Q9P0T4 197 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 NFKBIL1Q9UBC1 381 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 ANAPC5Q9UJX4 755 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 NOCTQ9UK39 431 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 GMEB2Q9UKD1 530 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 VSIG4Q9Y279 399 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 SALL1Q9NSC2 1324 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 A0A087WV48 116 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 E9PAM4 449 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 ANHXE9PGG2 379 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 ANGPTL1O95841 491 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 CALCAP01258 141 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 FAM58BPP0C7Q3 252 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 KLK2P20151 261 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 SLC1A3P43003 542 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 SLC1A4P43007 532 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 NAGLUP54802 743 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 LYZP61626 148 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 ECSCRQ19T08 205 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 MUC21Q5SSG8 566 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 FHL5Q5TD97 284 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 RNLSQ5VYX0 342 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 ZNF770Q6IQ21 691 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 SLC27A4Q6P1M0 643 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 EMBQ6PCB8 327 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 BAIAP2L2Q6UXY1 529 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 TMUB2Q71RG4 321 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 AGAP11Q8TF27 550 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 ITLN1Q8WWA0 313 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 SMPDL3AQ92484 453 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 RIT1Q92963 219 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 FERMT1Q9BQL6 677 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 INPP5KQ9BT40 448 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 MARCH7Q9H992 704 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 PFDN4Q9NQP4 134 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 DEPPQ9NTK1 212 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 PCDHGA1Q9Y5H4 931 aa2.45□□□□□ -2.02
SMCHD1-206ENST00000581631 TRBV5-4A0A0C4DH59 114 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 LOC390937A0A1W2PQ73 354 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 ARHGEF37A1IGU5 675 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 ACSL4O60488 711 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 OR6B1O95007 311 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 VENTXO95231 258 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 SEMA4FO95754 770 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 THY1P04216 161 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 RPN1P04843 607 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 VIMP08670 466 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 QDPRP09417 244 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 FAM200BP0CF97 657 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 SRD5A2P31213 254 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 DRD3P35462 400 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 MATKP42679 507 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 CAPZA1P52907 286 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 BACE1P56817 501 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 CYLC2Q14093 348 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 POM121L1PQ3SYA9 428 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 TEX35Q5T0J7 233 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 MEX3DQ86XN8 651 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 CREBRFQ8IUR6 639 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 TIGD4Q8IY51 512 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 TDHQ8IZJ6 230 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 SLC43A2Q8N370 569 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 CCDC89Q8N998 374 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 BANPQ8N9N5 519 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 SMYD1Q8NB12 490 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 KIAA1524Q8TCG1 905 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 LIPHQ8WWY8 451 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 BSCL2Q96G97 398 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 RUNDC3BQ96NL0 473 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 ALKBH3Q96Q83 286 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 INTS14Q96SY0 518 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 PINK1Q9BXM7 581 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 PDRG1Q9NUG6 133 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 CLEC5AQ9NY25 188 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 CLIC5Q9NZA1 410 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 ABCD2Q9UBJ2 740 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 SWAP70Q9UH65 585 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 SH3GLB1Q9Y371 365 aa2.44□□□□□ -2.02
SMCHD1-206ENST00000581631 A0A1W2PQ72 361 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 IGLON5A6NGN9 336 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 KRTAP4-16G5E9R7 235 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 FBP2O00757 339 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 B4GAT1O43505 415 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 EIF5BO60841 1220 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 RPL9P32969 192 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 ELK3P41970 407 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 OR3A1P47881 315 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 RPS27AP62979 156 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 RPP38P78345 283 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 RBBP4Q09028 425 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 ABRQ12979 859 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms