RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 CD46P15529 392 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 TPP2P29144 1249 aaPredicted RBP19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 EEF1DP29692 281 aaKnown RBP19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 STX2P32856 288 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 HNRNPFP52597 415 aaKnown RBP19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 CHIT1Q13231 466 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 ZRSR2Q15696 482 aaKnown RBP19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 SCUBE1Q8IWY4 988 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 TMEM52Q8NDY8 209 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 F2RL3Q96RI0 385 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 EFCAB11Q9BUY7 163 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 LRFN1Q9P244 771 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 CLDN16Q9Y5I7 305 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 TRGV8A0A0C4DH27 118 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 TGFBR3LH3BV60 316 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 CRABP2P29373 138 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 PPP2R1BP30154 601 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 RAB38P57729 211 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 MLF1P58340 268 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 IRF8Q02556 426 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 SLC25A25Q6KCM7 469 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 TRIM40Q6P9F5 258 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 ABHD17CQ6PCB6 329 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 GALNTL5Q7Z4T8 443 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 TBC1D1Q86TI0 1168 aaPredicted RBP19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 HORMAD2Q8N7B1 307 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 FAM47BQ8NA70 645 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 MRRFQ96E11 262 aaKnown RBP19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 ATOH8Q96SQ7 321 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 LRRC1Q9BTT6 524 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 DEFB126Q9BYW3 111 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 NMRAL1Q9HBL8 299 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 PRTFDC1Q9NRG1 225 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 PNO1Q9NRX1 252 aaKnown RBP19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 IGSF5Q9NSI5 407 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 PCNX1Q96RV3 2341 aa19.9■□□□□ 0.78
CSNK1D-215ENST00000580784 A0A088AWK7 358 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 UBXN8O00124 270 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 CLDN4O14493 209 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 MYO1DO94832 1006 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 LTA4HP09960 611 aaKnown RBP19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNF10P21506 573 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 CERS1P27544 350 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 HPDP32754 393 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 MTTPP55157 894 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 HSD17B7P56937 341 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 GTF3C1Q12789 2109 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 SLC13A2Q13183 592 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 LAPTM5Q13571 262 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 MAPKAPK3Q16644 382 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 HIST2H2ACQ16777 129 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 HIST2H2AA3Q6FI13 130 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNF227Q86WZ6 799 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 TMEM178AQ8NBL3 297 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 APCDD1LQ8NCL9 501 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 B3GNT7Q8NFL0 401 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 THAP3Q8WTV1 239 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 NXNL1Q96CM4 212 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 SERINC2Q96SA4 455 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 TSPAN10Q9H1Z9 355 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 PRDM7Q9NQW5 492 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 ZDHHC18Q9NUE0 388 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 NUDT4Q9NZJ9 180 aa19.89■□□□□ 0.77
CSNK1D-215ENST00000580784 TRBV11-1A0A0K0K1C0 115 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 ASPDHA6ND91 283 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 SUPT3HB4E1H0 165 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 CYR61O00622 381 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 SUPT3HO75486 399 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 CASP2P42575 452 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 CYB561P49447 251 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 LIM2P55344 173 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 NAB1Q13506 487 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 TBCCQ15814 346 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 PAGE2BQ5JRK9 111 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 C8orf74Q6P047 294 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 LRRC70Q7Z2Q7 622 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 UBE3DQ7Z6J8 389 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 KCTD4Q8WVF5 259 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 FRMD6Q96NE9 622 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 CSF3RQ99062 836 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 COPS7BQ9H9Q2 264 aaPredicted RBP19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 DAPP1Q9UN19 280 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 ACOT9Q9Y305 439 aa19.88■□□□□ 0.77
CSNK1D-215ENST00000580784 HMX2A2RU54 273 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 CCL21O00585 134 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 KERAO60938 352 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 SLC25A12O75746 678 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 MSH2P43246 934 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 HLCSP50747 726 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 CLCN2P51788 898 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 IRF9Q00978 393 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 ALDH6A1Q02252 535 aaKnown RBP19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 CKAP4Q07065 602 aaKnown RBP19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 BMPR2Q13873 1038 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 E2F2Q14209 437 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 MROH9Q5TGP6 573 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 CLNKQ7Z7G1 428 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNF595Q8IYB9 648 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 CENPLQ8N0S6 344 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms