RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	PRDM9	Q9NQV7	894 aa		12.83	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PRDM7	Q9NQW5	492 aa		12.83	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PSD3	Q9NYI0	1048 aa		12.83	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MMACHC	Q9Y4U1	282 aa		12.83	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TEP1	Q99973	2627 aa	Known RBP	12.83	□□□□□ -0.36
CSNK1D-208	ENST00000578501	LRRC14B	A6NHZ5	514 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TTLL8	A6PVC2	850 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	B4GALT2	O60909	372 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SIX3	O95343	332 aa	Predicted RBP	12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DDAH2	O95865	285 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SOX11	P35716	441 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ARFIP1	P53367	373 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MTTP	P55157	894 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RIPPLY3	P57055	190 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RUNX2	Q13950	521 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RCN2	Q14257	317 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RASA2	Q15283	850 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PLEKHN1	Q494U1	663 aa	Predicted RBP	12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CHSY3	Q70JA7	882 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TDRP	Q86YL5	185 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	HUS1B	Q8NHY5	278 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	M1AP	Q8TC57	530 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	BRIX1	Q8TDN6	353 aa	Known RBP	12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MZB1	Q8WU39	189 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	REPS1	Q96D71	796 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PHF21B	Q96EK2	531 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CMTM7	Q96FZ5	175 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	F2RL3	Q96RI0	385 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	LPAR4	Q99677	370 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TBCD	Q9BTW9	1192 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	C1QTNF3	Q9BXJ4	246 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MFRP	Q9BY79	579 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RBCK1	Q9BYM8	510 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	EPS8L2	Q9H6S3	715 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ACTR8	Q9H981	624 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MMP25	Q9NPA2	562 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SLAMF7	Q9NQ25	335 aa		12.82	□□□□□ -0.36
CSNK1D-208	ENST00000578501	IGKV3D-11	A0A0A0MRZ8	115 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	IGHV3-20	A0A0C4DH32	117 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TCRBV16S1A1N1	A0A5B0	115 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SYNDIG1L	A6NDD5	238 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	FAM227A	F5H4B4	570 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SEC24D	O94855	1032 aa	Predicted RBP	12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SCEL	O95171	688 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	GSTA1	P08263	222 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SBK3	P0C264	359 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PCNA	P12004	261 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	EEF1D	P29692	281 aa	Known RBP	12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TSFM	P43897	325 aa	Known RBP	12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RAB38	P57729	211 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	OR4D2	P58180	307 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ACTN3	Q08043	901 aa	Predicted RBP	12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SFT2D3	Q587I9	215 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	C10orf62	Q5T681	223 aa	Predicted RBP	12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DEPDC1	Q5TB30	811 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	H3F3C	Q6NXT2	135 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	UBE3D	Q7Z6J8	389 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ARMC2	Q8NEN0	867 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CPT1C	Q8TCG5	803 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	UBLCP1	Q8WVY7	318 aa	Predicted RBP	12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TSLP	Q969D9	159 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PTCHD1	Q96NR3	888 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	NTMT1	Q9BV86	223 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	NOL11	Q9H8H0	719 aa	Known RBP	12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	COPS7B	Q9H9Q2	264 aa	Predicted RBP	12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	LYRM4	Q9HD34	91 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DMRT3	Q9NQL9	472 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PTGFRN	Q9P2B2	879 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PCTP	Q9UKL6	214 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PPT2	Q9UMR5	302 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DAPP1	Q9UN19	280 aa		12.81	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DOCK10	Q96BY6	2186 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501		A0A0G2JN53	185 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	FOXE1	O00358	373 aa	Predicted RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CYR61	O00622	381 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CLDN4	O14493	209 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	OR7A17	O14581	309 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CLDN9	O95484	217 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TGFB1	P01137	390 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SHBG	P04278	402 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CELA2A	P08217	269 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RPS17	P08708	135 aa	Known RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ITGAM	P11215	1152 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TAC1	P20366	129 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	HIST1H1T	P22492	207 aa	Predicted RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	GNLY	P22749	145 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ATP5A1	P25705	553 aa	Known RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PTX3	P26022	381 aa	Predicted RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	LIM2	P55344	173 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	HSD17B7	P56937	341 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	BTG2	P78543	158 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PHEX	P78562	749 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	BTBD16	Q32M84	506 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PAPD4	Q6PIY7	484 aa	Known RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MYLK4	Q86YV6	388 aa	Predicted RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SCUBE1	Q8IWY4	988 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ZNF595	Q8IYB9	648 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	HAS2	Q92819	552 aa		12.8	□□□□□ -0.36

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