RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 RUNX2Q13950 521 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 PCOLCEQ15113 449 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 ZRSR2Q15696 482 aaKnown RBP20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 ZNF678Q5SXM1 525 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 VWA5B1Q5TIE3 1220 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 KHDRBS2Q5VWX1 349 aaKnown RBP20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 LANCL3Q6ZV70 420 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 UBE3DQ7Z6J8 389 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 PARP9Q8IXQ6 854 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 C4orf33Q8N1A6 199 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 RNF175Q8N4F7 328 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 PPP4R1Q8TF05 950 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 MTERF1Q99551 399 aaKnown RBP20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 SMAD5Q99717 465 aaKnown RBP20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 TBCDQ9BTW9 1192 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 ROGDIQ9GZN7 287 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 ZNF700Q9H0M5 742 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 EPN3Q9H201 632 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 OR51B5Q9H339 312 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 PRDM7Q9NQW5 492 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 LGALS13Q9UHV8 139 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 GRID1Q9ULK0 1009 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 PLAAQ9Y263 795 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 DOCK10Q96BY6 2186 aa20.89■□□□□ 0.93
SMARCD2-206ENST00000577990 PROCP04070 461 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 RAB38P57729 211 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 RPS13P62277 151 aaKnown RBP20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 CLCQ05315 142 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 SLC18A2Q05940 514 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 Q0VFX4 171 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 ABRAXAS2Q15018 415 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 CCDC153Q494R4 210 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 GGTA1PQ4G0N0 100 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 UNC50Q53HI1 259 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 DEPDC1Q5TB30 811 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 IRAK1BP1Q5VVH5 260 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 QSOX2Q6ZRP7 698 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 CPEB2Q7Z5Q1 589 aaKnown RBP20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 MILR1Q7Z6M3 343 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 ANKRD37Q7Z713 158 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 OR4F6Q8NGB9 312 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 WDR20Q8TBZ3 569 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 ADAMTS18Q8TE60 1221 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 TSLPQ969D9 159 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 MAGEB10Q96LZ2 347 aaPredicted RBP20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 CENPKQ9BS16 269 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 RELNP78509 3460 aa20.88■□□□□ 0.93
SMARCD2-206ENST00000577990 MAGEB17A8MXT2 336 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 FAM227AF5H4B4 570 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 PLIN3O60664 434 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 SUPT7LO94864 414 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 ALPPP05187 535 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 MYL2P10916 166 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 TSPAN8P19075 237 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 IMPDH1P20839 514 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 NSDHLQ15738 373 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 ZYG11AQ6WRX3 759 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 ZNF793Q6ZN11 406 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 TRABD2AQ86V40 505 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 KBTBD2Q8IY47 623 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 TRPC4APQ8TEL6 797 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 L3HYPDHQ96EM0 354 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 TUBB6Q9BUF5 446 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 TMEM109Q9BVC6 243 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 LHPPQ9H008 270 aa20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 ZNF552Q9H707 407 aaPredicted RBP20.87■□□□□ 0.93
SMARCD2-206ENST00000577990 PRRC2CQ9Y520 2896 aaKnown RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 IGHV3-20A0A0C4DH32 117 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 G3V2L1 256 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 FOXE1O00358 373 aaPredicted RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 SAP18O00422 153 aaKnown RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 RTCAO00442 366 aaKnown RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 PPP6CO00743 305 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 PRMT3O60678 531 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 SCELO95171 688 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 ATP5A1P25705 553 aaKnown RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 PTX3P26022 381 aaPredicted RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 SSR2P43308 183 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 RAP1GDS1P52306 607 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 LIM2P55344 173 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 KLRB1Q12918 225 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 AP5B1Q2VPB7 878 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 C10orf62Q5T681 223 aaPredicted RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 FRG2Q64ET8 278 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 TTC19Q6DKK2 380 aaPredicted RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 LETMD1Q6P1Q0 360 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 HPS6Q86YV9 775 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 RGMAQ96B86 450 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 CCDC126Q96EE4 140 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 THOC3Q96J01 351 aaKnown RBP20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 PTCHD1Q96NR3 888 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 FRG2BQ96QU4 278 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 PRDM9Q9NQV7 894 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 PSD3Q9NYI0 1048 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 C5AR2Q9P296 337 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 DAPP1Q9UN19 280 aa20.86■□□□□ 0.93
SMARCD2-206ENST00000577990 A0A1B0GTL3 188 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 SEC24DO94855 1032 aaPredicted RBP20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 SERPINA7P05543 415 aa20.85■□□□□ 0.93
SMARCD2-206ENST00000577990 HIST1H1TP22492 207 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms