RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 CDK1P06493 297 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 CKMT1AP12532 417 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 CELP19835 753 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 HTR2BP41595 481 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ZNF81P51508 661 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ZNF613Q6PF04 617 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ADGRG2Q8IZP9 1017 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 OR52N2Q8NGI0 321 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 SMPDL3AQ92484 453 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 MOAP1Q96BY2 351 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 CHFRQ96EP1 664 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 RIOK2Q9BVS4 552 aaKnown RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 SYNDIG1Q9H7V2 258 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 FBXW2Q9UKT8 454 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 RREB1Q92766 1687 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 SCAMP2O15127 329 aaKnown RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 TRIM3O75382 744 aaPredicted RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 SNAI1O95863 264 aaPredicted RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ZNF24P17028 368 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ACVR2AP27037 513 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 GABRB3P28472 473 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 SHMT2P34897 504 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ADRA1AP35348 466 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 AVPR1BP47901 424 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 LACC1Q8IV20 430 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ATP6V1C2Q8NEY4 427 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ZMIZ2Q8NF64 920 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 NELL2Q99435 816 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 TMEM175Q9BSA9 504 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 LGR4Q9BXB1 951 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 TP63Q9H3D4 680 aaPredicted RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 BRD7Q9NPI1 651 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 TMEM5Q9Y2B1 443 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 CLCA3PQ9Y6N3 262 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ANKRD12Q6UB98 2062 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 COL22A1Q8NFW1 1626 aaPredicted RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 LOC285095A0A1B0GVY8 99 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 METTL21EPA6NDL7 271 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 PCP4L1A6NKN8 68 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 NFKBIEO00221 500 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 UGDHO60701 494 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 MMP20O60882 483 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 FLT3LGP49771 235 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 SWI5Q1ZZU3 235 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 MICAQ29983 383 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 PRSS55Q6UWB4 352 aaPredicted RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 PLCZ1Q86YW0 608 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 LILRB4Q8NHJ6 448 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 TSEN15Q8WW01 171 aaKnown RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 THRSPQ92748 146 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 GON7Q9BXV9 100 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 TRIM2Q9C040 744 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 RDH14Q9HBH5 336 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 TMEM39AQ9NV64 488 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 DEC1Q9P2X7 70 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 XKRYO14609 159 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ZNF195O14628 629 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 EPCAMP16422 314 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 HK1P19367 917 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 NT5EP21589 574 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 RPL10P27635 214 aaKnown RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 C22orf42Q6IC83 251 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 TMCO2Q7Z6W1 182 aaPredicted RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 IQCHQ86VS3 1027 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 GPALPP1Q8IXQ4 340 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 COX18Q8N8Q8 333 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 RPLP0P6Q8NHW5 317 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 WFIKKN2Q8TEU8 576 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 DNAJA4Q8WW22 397 aaPredicted RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 ASB15Q8WXK1 588 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 VMP1Q96GC9 406 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 CD180Q99467 661 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 WRAP53Q9BUR4 548 aaKnown RBP9.98□□□□□ -0.81
PTPRM-205ENST00000577827 NTMT1Q9BV86 223 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 OR2AG1Q9H205 316 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 OR51B5Q9H339 312 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 BTNL2Q9UIR0 455 aa9.98□□□□□ -0.81
PTPRM-205ENST00000577827 C12orf71A8MTZ7 269 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 DNASE1P24855 282 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 PCGF2P35227 344 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 SELENOWP63302 87 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 ADARB1P78563 741 aaKnown RBP9.97□□□□□ -0.81
PTPRM-205ENST00000577827 XKR4Q5GH76 650 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 SPRYD7Q5W111 196 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 PLAG1Q6DJT9 500 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 FAM171BQ6P995 826 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 PIAS4Q8N2W9 510 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-205ENST00000577827 OR9A1PQ8NGU1 263 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 FAM110BQ8TC76 370 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 GTF2H4Q92759 462 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 ABCG5Q9H222 651 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 STOX2Q9P2F5 926 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-205ENST00000577827 RHCGQ9UBD6 479 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 YIPF1Q9Y548 306 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 KANTRA0A1W2PQU2 76 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 PTGESO14684 152 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 SLC16A6O15403 523 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 FLRT2O43155 660 aa9.97□□□□□ -0.81
PTPRM-205ENST00000577827 OSMP13725 252 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms