RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 CTRB1P17538 263 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 AMD1P17707 334 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 GABRG2P18507 467 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 ACSL1P33121 698 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 S100A5P33763 92 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 TPMTP51580 245 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 PNLIPRP1P54315 467 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 CLDN8P56748 225 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 GABARAPL2P60520 117 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 KRR1Q13601 381 aaKnown RBP13.22□□□□□ -0.29
RNF43-202ENST00000577625 FAM174BQ3ZCQ3 159 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 AGAP6Q5VW22 663 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 CTRB2Q6GPI1 263 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 DLEU7Q6UYE1 221 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 SLCO4C1Q6ZQN7 724 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 HID1Q8IV36 788 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 MAGEE2Q8TD90 523 aaPredicted RBP13.22□□□□□ -0.29
RNF43-202ENST00000577625 NUDT8Q8WV74 236 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 SLC13A3Q8WWT9 602 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 RAD51AP1Q96B01 352 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 WDR34Q96EX3 536 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 APIPQ96GX9 242 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 FCRL1Q96LA6 429 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 AGAP4Q96P64 663 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 BRF2Q9HAW0 419 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 ANKHQ9HCJ1 492 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 SLC2A4RGQ9NR83 387 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 ABCB10Q9NRK6 738 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 GIMAP4Q9NUV9 329 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 SPATA6Q9NWH7 488 aaPredicted RBP13.22□□□□□ -0.29
RNF43-202ENST00000577625 PLAGL1Q9UM63 463 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
RNF43-202ENST00000577625 LRP4O75096 1905 aa13.22□□□□□ -0.29
RNF43-202ENST00000577625 PRR19A6NJB7 356 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 FAM25AB3EWG3 89 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 FAM25CB3EWG5 89 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 FAM25GB3EWG6 89 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 SRFP11831 508 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 DDX5P17844 614 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 EEFSECP57772 596 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 RACK1P63244 317 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 SMAD2Q15796 467 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 RABL3Q5HYI8 236 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 TMEM31Q5JXX7 168 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 SNAP47Q5SQN1 464 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 TUBA3EQ6PEY2 450 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 R3HCC1LQ7Z5L2 792 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 CCDC103Q8IW40 242 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 OR6F1Q8NGZ6 308 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 OR5K2Q8NHB8 316 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 HDAC2Q92769 488 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 METTL2AQ96IZ6 378 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 MUS81Q96NY9 551 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 IL17FQ96PD4 163 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 TIMM29Q9BSF4 260 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 MUC13Q9H3R2 512 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 SOX17Q9H6I2 414 aaPredicted RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 SGK2Q9HBY8 427 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 GMPR2Q9P2T1 348 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 VPS29Q9UBQ0 182 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 NDRG2Q9UN36 371 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 DYRK1BQ9Y463 629 aa13.21□□□□□ -0.29
RNF43-202ENST00000577625 CFAP20Q9Y6A4 193 aaKnown RBP13.21□□□□□ -0.29
RNF43-202ENST00000577625 POM121BA6NF01 834 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 CENPXA8MT69 81 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 HAT1O14929 419 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 ZW10O43264 779 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 LATO43561 262 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 PGRP06401 933 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 SLC35G4P0C7Q5 338 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 SDC1P18827 310 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 KELP23276 732 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 CLCNKAP51800 687 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 PWP1Q13610 501 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 TSTA3Q13630 321 aaPredicted RBP13.21□□□□□ -0.3
RNF43-202ENST00000577625 FXNQ16595 210 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 PYCR3Q53H96 274 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 SPANXN4Q5MJ08 99 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 ATAD3CQ5T2N8 411 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 DESI1Q6ICB0 168 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 ZNF544Q6NX49 715 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 Q6ZS52 159 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 TMPRSS11BQ86T26 416 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 TRIM69Q86WT6 500 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 SVOPQ8N4V2 548 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 KRTCAP2Q8N6L1 136 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 TRPV3Q8NET8 790 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 OR7G3Q8NG95 312 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 APOLD1Q96LR9 279 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 BTBD1Q9H0C5 482 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 ALG2Q9H553 416 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 DDX28Q9NUL7 540 aaKnown RBP13.21□□□□□ -0.3
RNF43-202ENST00000577625 ACSL5Q9ULC5 683 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 PMF1-BGLAPU3KQ54 211 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 FANCMQ8IYD8 2048 aa13.21□□□□□ -0.3
RNF43-202ENST00000577625 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms