RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 IGLV3-12A0A075B6K2 115 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 IGHV1-45A0A0A0MS14 117 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 ZCWPW2A0A1B0GU75 182 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 ARHGAP10A1A4S6 786 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 CTAGE9A4FU28 777 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 H3BMM5 538 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 KIF5CO60282 957 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 HAUS5O94927 633 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 FKBP9O95302 570 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 WDPCPO95876 746 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 CATP04040 527 aaKnown RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 SERPINA7P05543 415 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 C8BP07358 591 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 HEXBP07686 556 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 ITGAMP11215 1152 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 OGNP20774 298 aaKnown RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 ATP5DP30049 168 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 SLC26A3P40879 764 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 SLC1A2P43004 574 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 MAGEA6P43360 314 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 PGGT1BP53609 377 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 ARG2P78540 354 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 PMP22Q01453 160 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 PRDX1Q06830 199 aaKnown RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 THOC5Q13769 683 aaKnown RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 PCOLCEQ15113 449 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 RNF187Q5TA31 235 aaPredicted RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 FCRLBQ6BAA4 426 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 ZNF470Q6ECI4 717 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 C4orf22Q6V702 233 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 MBOAT1Q6ZNC8 495 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 LANCL3Q6ZV70 420 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 NDUFAF7Q7L592 441 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 FJX1Q86VR8 437 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 SRRM1Q8IYB3 904 aaKnown RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 OR9A4Q8NGU2 314 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 MAGOHBQ96A72 148 aaKnown RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 NACC2Q96BF6 587 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 PRAP1Q96NZ9 151 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 LMF1Q96S06 567 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 GPR21Q99679 349 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 FAM114A2Q9NRY5 505 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 C20orf96Q9NUD7 363 aaPredicted RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 RIC8BQ9NVN3 520 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 HCN3Q9P1Z3 774 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 CDC14AQ9UNH5 594 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 ZKSCAN5Q9Y2L8 839 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 MRFAP1Q9Y605 127 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 SPTAN1Q13813 2472 aaKnown RBP5.88□□□□□ -1.47
NUP88-212ENST00000576708 MDC1Q14676 2089 aaKnown RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 DOCK10Q96BY6 2186 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 PRRC2CQ9Y520 2896 aaKnown RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 LOC102723996A0A087X1L8 192 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 FAM237BA0A1B0GVD1 139 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 FEZF1A0PJY2 475 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 SDR42E2A6NKP2 422 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 FAM90A27PA6NNH2 459 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 A8MUI8 341 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 GFYI3L273 518 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 SGK494L7N484 410 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ACOT7O00154 380 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 AP3B1O00203 1094 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 SCDO00767 359 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 PFDN6O15212 129 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ZNHIT1O43257 154 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 LCMT2O60294 686 aaKnown RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 DNAJB6O75190 326 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 VPS26AO75436 327 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 BANF1O75531 89 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 SEC24DO94855 1032 aaPredicted RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 BMP10O95393 424 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 UQCRHP07919 91 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ANXA5P08758 320 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 CCDC175P0C221 793 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 MPC1LP0DKB6 136 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 MED14OSP0DP75 135 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 PRF1P14222 555 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 IL1RNP18510 177 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 CXCR2P25025 360 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 MST1P26927 711 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 IMPA1P29218 277 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 COILP38432 576 aaPredicted RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 MASP1P48740 699 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 TNFSF10P50591 281 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 MECP2P51608 486 aaKnown RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 TDGF1P3P51864 188 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ADARP55265 1226 aaKnown RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 CCZ1BP86790 482 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 CCZ1P86791 482 aaPredicted RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 CDK16Q00536 496 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 TIAL1Q01085 375 aaKnown RBP eCLIP5.87□□□□□ -1.47
NUP88-212ENST00000576708 ARHGAP19Q14CB8 494 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ZRSR2Q15696 482 aaKnown RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 CR1LQ2VPA4 569 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 HSP90AA5PQ58FG0 334 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 THEMIS2Q5TEJ8 643 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 MFSD4BQ5TF39 518 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ZNF324BQ6AW86 544 aaPredicted RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 HIBCHQ6NVY1 386 aaPredicted RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 RPUSD3Q6P087 351 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms