RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 THOC5Q13769 683 aaKnown RBP9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 DHX34Q14147 1143 aaKnown RBP9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 DAZAP2Q15038 168 aaPredicted RBP9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 PHKG1Q16816 387 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 SKOR2Q2VWA4 1001 aaPredicted RBP9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 CATSPEREQ5SY80 951 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 DUPD1Q68J44 220 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 LRRC8EQ6NSJ5 796 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 IL20RBQ6UXL0 311 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 SCUBE1Q8IWY4 988 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 CA13Q8N1Q1 262 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 TMEM251Q8N6I4 163 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 ANKRD53Q8N9V6 530 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 WFDC11Q8NEX6 87 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 GOT1L1Q8NHS2 421 aaPredicted RBP9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 NCLNQ969V3 563 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 PYCR2Q96C36 320 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 PDLIM2Q96JY6 352 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 PWWP2AQ96N64 755 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 AARSD1Q9BTE6 412 aaKnown RBP9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 SPNS1Q9H2V7 528 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 RHBGQ9H310 441 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 TSPY26PQ9H489 355 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 KLHL31Q9H511 634 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 LIN28AQ9H9Z2 209 aaKnown RBP9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 HPF1Q9NWY4 346 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 MYOTQ9UBF9 498 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 MMACHCQ9Y4U1 282 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 FBN1P35555 2871 aaKnown RBP9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 JMJD1CQ15652 2540 aa9.25□□□□□ -0.93
CALCOCO2-227ENST00000575560 URADA6NGE7 173 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 SDR42E2A6NKP2 422 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 C4orf51C9J302 202 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 FAM47E-STBD1D6RA91 191 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 TGFBR3LH3BV60 316 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 ATE1O95260 518 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 CELA3AP09093 270 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 PPP2R1BP30154 601 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 HNF4AP41235 474 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 DHX9Q08211 1270 aaKnown RBP9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 SP140Q13342 867 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 CSHL1Q14406 222 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 SLC10A1Q14973 349 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 KCTD19Q17RG1 926 aaPredicted RBP9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 DEFB113Q30KQ7 82 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 ZNF750Q32MQ0 723 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 BBS9Q3SYG4 887 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 C1orf185Q5T7R7 199 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 RIPPLY2Q5TAB7 128 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 HECTD2Q5U5R9 776 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 CASC4Q6P4E1 433 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 PAMR1Q6UXH9 720 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 GK5Q6ZS86 529 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 Q71RC1 249 aaPredicted RBP9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 GSTA5Q7RTV2 222 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 LMNTD2Q8IXW0 634 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 FAM109AQ8N4B1 249 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 TBC1D19Q8N5T2 526 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 RNF10Q8N5U6 811 aaKnown RBP9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 TRPV3Q8NET8 790 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 FAM222BQ8WU58 562 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 ASB15Q8WXK1 588 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 NEIL2Q969S2 332 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 ARSGQ96EG1 525 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 C18orf12Q96KH6 178 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 RASL10BQ96S79 203 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 FAM173AQ9BQD7 235 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 CCDC77Q9BR77 488 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 CNPPD1Q9BV87 410 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 AICDAQ9GZX7 198 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 IL1RL2Q9HB29 575 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 PNO1Q9NRX1 252 aaKnown RBP9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 B4GALT7Q9UBV7 327 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 FBXO5Q9UKT4 447 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 ACAD8Q9UKU7 415 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 CBLCQ9ULV8 474 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 ZKSCAN5Q9Y2L8 839 aa9.24□□□□□ -0.93
CALCOCO2-227ENST00000575560 FN1P02751 2386 aaKnown RBP9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 G3V3Y1 287 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 HCN1O60741 890 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 RAF1P04049 648 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 SERPINA6P08185 405 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 HIST1H2AGP0C0S8 130 aaPredicted RBP9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 GABRA1P14867 456 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 HIST1H2ADP20671 130 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 SOX3P41225 446 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 KCNJ1P48048 391 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 MAN2A2P49641 1150 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 RGS4P49798 205 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 HSD17B7P56937 341 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 SARNPP82979 210 aaKnown RBP9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 RUNX2Q13950 521 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 FBXL19-AS1Q494R0 122 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 FLYWCH1Q4VC44 716 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 WLSQ5T9L3 541 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 UGT3A1Q6NUS8 523 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 PAQR3Q6TCH7 311 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 SEM1Q6ZVN7 128 aa9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 WDR53Q7Z5U6 358 aaPredicted RBP9.23□□□□□ -0.93
CALCOCO2-227ENST00000575560 TMEM139Q8IV31 216 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms