RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 BCKDKO14874 412 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 HTR1AP08908 422 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 HOXB6P17509 224 aaKnown RBP22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 NTSR1P30989 418 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 RPL3P39023 403 aaKnown RBP22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 RPS26P62854 115 aaKnown RBP22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 CSNK1G2P78368 415 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 DMPKQ09013 629 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 LRRC74AQ0VAA2 488 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 GPR107Q5VW38 600 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 KDM4DQ6B0I6 523 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 ZC3H7AQ8IWR0 971 aaKnown RBP22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 IL17RCQ8NAC3 791 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 PIK3C3Q8NEB9 887 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TAMM41Q96BW9 452 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 AICDAQ9GZX7 198 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 CA5BQ9Y2D0 317 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 PRAMEF25A6NGN4 478 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 TMPRSS11DO60235 418 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 EGFP01133 1207 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 TNFRSF4P43489 277 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 CLK3P49761 638 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 BIRC2Q13490 618 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 OR2A1Q8NGT9 310 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 HDAC2Q92769 488 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 MTERF3Q96E29 417 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 DOHHQ9BU89 302 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 REEP1Q9H902 201 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 FANCEQ9HB96 536 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 TMEM184CQ9NVA4 438 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 TEX10Q9NXF1 929 aaPredicted RBP22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 A0A1W2PQF6 199 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 PDZK1P1A8MUH7 402 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 DNTTP04053 509 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 PRIM2P49643 509 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 MAPK10P53779 464 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 PIWIL3Q7Z3Z3 882 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 UBE3DQ7Z6J8 389 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 C12orf43Q96C57 262 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 SCHIP1Q9P0W5 487 aaPredicted RBP22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 SLC17A4Q9Y2C5 497 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 SCN3AQ9NY46 2000 aa22.56■■□□□ 1.2
NPLOC4-217ENST00000574897 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 SLC16A6O15403 523 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 RRM2P31350 389 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 HSD17B2P37059 387 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 ARHGDIAP52565 204 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 CLDN2P57739 230 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 SELENOWP63302 87 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 TEAD4Q15561 434 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 RBM48Q5RL73 367 aaKnown RBP22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 IKBIPQ70UQ0 350 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 APOOQ9BUR5 198 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 FGF22Q9HCT0 170 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 PAK1IP1Q9NWT1 392 aaPredicted RBP22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 AHSPQ9NZD4 102 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 LMCD1Q9NZU5 365 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 TESMINQ9Y4I5 508 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 WASHC1A8K0Z3 465 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 M0QX08 132 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 NDUFS4O43181 175 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 KLF8O95600 359 aaPredicted RBP22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 DDCP20711 480 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 CXCR2P25025 360 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 PLA2G16P53816 162 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 IL5RAQ01344 420 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 EEF1A2Q05639 463 aaKnown RBP22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 XAF1Q6GPH4 301 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 LAIR1Q6GTX8 287 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 WASH2PQ6VEQ5 465 aa22.55■■□□□ 1.2
NPLOC4-217ENST00000574897 TRIOO75962 3097 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 POM121BA6NF01 834 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 GPR89AB7ZAQ6 455 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 CAPN5O15484 640 aaPredicted RBP22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 SEMA3DO95025 777 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 GPR89BP0CG08 455 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 ITGAMP11215 1152 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 HOXB2P14652 356 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 TEAD1P28347 426 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 RAB28P51157 221 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 ADAM15Q13444 863 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 TMEM31Q5JXX7 168 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 KIAA1161Q6NSJ0 714 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 OR52E1Q8NGJ3 308 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 TIMM29Q9BSF4 260 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 PCBD2Q9H0N5 130 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 RUBCNLQ9H714 662 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 NDUFAF4Q9P032 175 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 ICKQ9UPZ9 632 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 XPNPEP2O43895 674 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 FUT4P22083 530 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 CDK6Q00534 326 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 KRT33BQ14525 404 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 RFX4Q33E94 735 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 ZC3H12BQ5HYM0 836 aaKnown RBP22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 BROXQ5VW32 411 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 ATG16L2Q8NAA4 619 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 SMYD1Q8NB12 490 aa22.54■■□□□ 1.2
NPLOC4-217ENST00000574897 BPIFB6Q8NFQ5 453 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms