RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CMTM5Q96DZ9 223 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 SERINC2Q96SA4 455 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 ROGDIQ9GZN7 287 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 CLMPQ9H6B4 373 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 OCIAD1Q9NX40 245 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 TEX10Q9NXF1 929 aaPredicted RBP22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 SERTAD3Q9UJW9 196 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 EXO1Q9UQ84 846 aaKnown RBP22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 CFAP73A6NFT4 308 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 GALR3O60755 368 aaPredicted RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 DNAJB6O75190 326 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 SNRPB2P08579 225 aaKnown RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 OLR1P78380 273 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 NDUFA9Q16795 377 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 ANKRD26P1Q6NSI1 321 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 GPR135Q8IZ08 494 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 KIF2BQ8N4N8 673 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 OR9A4Q8NGU2 314 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 ANKHQ9HCJ1 492 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 FBXW2Q9UKT8 454 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 PCDHGA1Q9Y5H4 931 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 SCN3AQ9NY46 2000 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 A0A088AWK7 358 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 A0A0A6YYC8 382 aaPredicted RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 I3L1I5 382 aaPredicted RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 SGK494L7N484 410 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 B3GALT2O43825 422 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 ESRRAP11474 423 aaPredicted RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 CAPN3P20807 821 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 ZNF10P21506 573 aaPredicted RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 PRDX6P30041 224 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 DGKQP52824 942 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 CLNS1AP54105 237 aaKnown RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 KCNK10P57789 538 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 KCNJ2P63252 427 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 C2orf80Q0P641 193 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 MAPRE2Q15555 327 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 FAM174BQ3ZCQ3 159 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 VPS26BQ4G0F5 336 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 TIGD2Q4W5G0 525 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 SPANXN4Q5MJ08 99 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 MRM1Q6IN84 353 aaKnown RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 FAM71E1Q6IPT2 247 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 DHRS13Q6UX07 377 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 AGBL5Q8NDL9 886 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 RP9Q8TA86 221 aaKnown RBP22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 VPS33AQ96AX1 596 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 ENAMQ9NRM1 1142 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 ASB4Q9Y574 426 aa22.78■■□□□ 1.24
ATPAF1-213ENST00000574428 RIF1Q5UIP0 2472 aaKnown RBP22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 EFCAB7A8K855 629 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 SCAMP2O15127 329 aaKnown RBP22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 PRMT3O60678 531 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 HPCAL1P37235 193 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 KLC1Q07866 573 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 UGT8Q16880 541 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 GARNL3Q5VVW2 1013 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 IKBIPQ70UQ0 350 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 METTL27Q8N6F8 245 aaPredicted RBP22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 GLB1L3Q8NCI6 653 aaPredicted RBP22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 OR7A2PQ8NGA2 310 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 OR5T3Q8NGG3 340 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 SLC7A6OSQ96CW6 309 aaPredicted RBP22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 SPDL1Q96EA4 605 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 RNF31Q96EP0 1072 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 MAPKAP1Q9BPZ7 522 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 CUTCQ9NTM9 273 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 TMEM45AQ9NWC5 275 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 ATG4BQ9Y4P1 393 aa22.77■■□□□ 1.24
ATPAF1-213ENST00000574428 SPAARA0A1B0GVQ0 90 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 FOXS1O43638 330 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 RDH16O75452 317 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 COX7A2P14406 83 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 NQO1P15559 274 aaKnown RBP22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 PCSK2P16519 638 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 CCKBRP32239 447 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 C21orf58P58505 322 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 TRA2BP62995 288 aaKnown RBP22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 RUNX2Q13950 521 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 MUM1Q2TAK8 710 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 PGS1Q32NB8 556 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 TLDC1Q6P9B6 456 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 SLCO6A1Q86UG4 719 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 SHISA5Q8N114 240 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 EFCAB3Q8N7B9 438 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 TESCQ96BS2 214 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 SLC25A23Q9BV35 468 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 LRMDAQ9H2I8 198 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 SLC52A3Q9NQ40 469 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 SPTBP11277 2137 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 CCDC154A6NI56 674 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 PRKRAO75569 313 aaKnown RBP22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 CALB2P22676 271 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 EMP3P54852 163 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 FAM53BQ14153 422 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 NDUFAF5Q5TEU4 345 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 CDCP2Q5VXM1 449 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 TTLL10Q6ZVT0 673 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 GPR180Q86V85 440 aa22.76■■□□□ 1.23
ATPAF1-213ENST00000574428 REEP4Q9H6H4 257 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms