RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ZNF449Q6P9G9 518 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 PAPD4Q6PIY7 484 aaKnown RBP6.39□□□□□ -1.39
CHD3-213ENST00000571249 PLXDC2Q6UX71 529 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 DNM1P46Q6ZS02 220 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 KIAA0408Q6ZU52 694 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 CYP4V2Q6ZWL3 525 aaPredicted RBP6.39□□□□□ -1.39
CHD3-213ENST00000571249 POLNQ7Z5Q5 900 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 TAX1BP1Q86VP1 789 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 LRRC49Q8IUZ0 686 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 PSTKQ8IV42 348 aaKnown RBP6.39□□□□□ -1.39
CHD3-213ENST00000571249 KRT222Q8N1A0 295 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 KIF2BQ8N4N8 673 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 ZNF398Q8TD17 642 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 ALG3Q92685 438 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 SARAFQ96BY9 339 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 SPATA13Q96N96 652 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 CSPG4P5Q96PW8 444 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 TNFRSF13CQ96RJ3 184 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 NAP1L3Q99457 506 aaPredicted RBP6.39□□□□□ -1.39
CHD3-213ENST00000571249 LRRC1Q9BTT6 524 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 SLCO5A1Q9H2Y9 848 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 GOLPH3Q9H4A6 298 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 CXorf56Q9H5V9 222 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 SH2D2AQ9NP31 389 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 DEPPQ9NTK1 212 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 SMOXQ9NWM0 555 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 POLG2Q9UHN1 485 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 PCDHA3Q9Y5H8 950 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 FAM169AQ9Y6X4 670 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 HERC2O95714 4834 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 ARHGAP21Q5T5U3 1957 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 A0A0A6YYC8 382 aaPredicted RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 ATP6AP2A0A1C7CYW4 349 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 ARHGEF33A8MVX0 844 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 I3L1I5 382 aaPredicted RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 LINC01387J3KSC0 135 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 CEP104O60308 925 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 EIF4EBP3O60516 100 aaPredicted RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 ATP6AP2O75787 350 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 PROSCO94903 275 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 SEC31AO94979 1220 aaKnown RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 ERVK-10P10266 1014 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 LOXP28300 417 aaPredicted RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 PRLHRP49683 370 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 VLDLRP98155 873 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 ACTN3Q08043 901 aaPredicted RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 FAPQ12884 760 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 MAMLD1Q13495 774 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 SF1Q15637 639 aaKnown RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 CYP1B1Q16678 543 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 PRTGQ2VWP7 1150 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 SFT2D3Q587I9 215 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 CYB5R2Q6BCY4 276 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 C8orf74Q6P047 294 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 EMBQ6PCB8 327 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 RGS9BPQ6ZS82 235 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 SLC22A16Q86VW1 577 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 IFT20Q8IY31 132 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.38□□□□□ -1.39
CHD3-213ENST00000571249 TBC1D21Q8IYX1 336 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 CYP4Z2PQ8N1L4 340 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 MREGQ8N565 214 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 UBL4BQ8N7F7 174 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 ELP5Q8TE02 316 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 CAVIN3Q969G5 261 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 MVB12AQ96EY5 273 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 DCUN1D1Q96GG9 259 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 WFIKKN1Q96NZ8 548 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 LPAR4Q99677 370 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 ELAC2Q9BQ52 826 aaKnown RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 WDR83Q9BRX9 315 aaKnown RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 RBM24Q9BX46 236 aaKnown RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 TTTY12Q9BZ98 90 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 LDAHQ9H6V9 325 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 EXO5Q9H790 373 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 TCF7L1Q9HCS4 588 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 MRPL47Q9HD33 250 aaKnown RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 GALNT8Q9NY28 637 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 PSD3Q9NYI0 1048 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 SMARCAL1Q9NZC9 954 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 JKAMPQ9P055 326 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 NDRG3Q9UGV2 375 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 ING1Q9UK53 422 aaPredicted RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 DRG1Q9Y295 367 aaKnown RBP6.38□□□□□ -1.39
CHD3-213ENST00000571249 NFS1Q9Y697 457 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 SCINQ9Y6U3 715 aa6.38□□□□□ -1.39
CHD3-213ENST00000571249 EML6Q6ZMW3 1958 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 A0A0G2JMM0 328 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 A0A1W2PPB8 328 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 A0A1W2PRS3 328 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 FAM234BA2RU67 622 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 TMEM191CA6NGB0 347 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 KIR3DP1A8MWS1 328 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 TARM1B6A8C7 271 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 J3QL48 77 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 MYO1FO00160 1098 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 FCHO1O14526 889 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 RAD51CO43502 376 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 FOXS1O43638 330 aa6.37□□□□□ -1.39
CHD3-213ENST00000571249 NRP2O60462 931 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms