RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 COPG2Q9UBF2 871 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 MMACHCQ9Y4U1 282 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 TEX15Q9BXT5 2789 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 CENPEQ02224 2701 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 IGKV3D-11A0A0A0MRZ8 115 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 A0A0G2JN53 185 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 A0A1B0GUH1 482 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 TCRBV16S1A1N1A0A5B0 115 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 ESYT3A0FGR9 886 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 LRIT2A6NDA9 550 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 SUPT3HB4E1H0 165 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 FAM227AF5H4B4 570 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 B3GALT2O43825 422 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 MAN1A2O60476 641 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 CCNT2O60583 730 aaKnown RBP11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 SUPT3HO75486 399 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 FAM155BO75949 473 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 UNC5CO95185 931 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 CLDN1O95832 211 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 C1QAP02745 245 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 SLC35E2BP0CK96 405 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 TFEBP19484 476 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 CRABP2P29373 138 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 EEF1DP29692 281 aaKnown RBP11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 CD96P40200 585 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 PLA2G16P53816 162 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 PMP22Q01453 160 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 TGM3Q08188 693 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 HIST2H2ACQ16777 129 aaPredicted RBP11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 C1QL3Q5VWW1 255 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 HIST2H2AA3Q6FI13 130 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 LRRC70Q7Z2Q7 622 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 CMC1Q7Z7K0 106 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 FJX1Q86VR8 437 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 RPS19BP1Q86WX3 136 aaKnown RBP11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 KIF2BQ8N4N8 673 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 TMEM178AQ8NBL3 297 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 OR2L5Q8NG80 312 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 STAG3L4Q8TBR4 150 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 ELP5Q8TE02 316 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 ESAMQ96AP7 390 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 SIGLEC12Q96PQ1 595 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 NPAS2Q99743 824 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 NPLQ9BXD5 320 aaPredicted RBP11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 AICDAQ9GZX7 198 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 NMRAL1Q9HBL8 299 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 KLHL1Q9NR64 748 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 NUDT4Q9NZJ9 180 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 SEC14L3Q9UDX4 400 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 PTBP2Q9UKA9 531 aaKnown RBP11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 MRPS33Q9Y291 106 aaKnown RBP11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 PCDHGB6Q9Y5F9 930 aa11.58□□□□□ -0.56
CTDNEP1-205ENST00000570828 NBPF19A0A087WUL8 3843 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 A8MUA0 341 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 CLDN4O14493 209 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 SIAH2O43255 324 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 KERAO60938 352 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 MLYCDO95822 493 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 LTA4HP09960 611 aaKnown RBP11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 MST1P26927 711 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 ST13P50502 369 aaKnown RBP11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 RAB38P57729 211 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 IRF8Q02556 426 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 RBPJQ06330 500 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 SLC13A2Q13183 592 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 CHIT1Q13231 466 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 LAPTM5Q13571 262 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 DOC2AQ14183 400 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 RCN2Q14257 317 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 EFTUD2Q15029 972 aaKnown RBP eCLIP11.57□□□□□ -0.564e-7■■■■■ 34.6
CTDNEP1-205ENST00000570828 TERF2Q15554 542 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 TRADDQ15628 312 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 SPINK14Q6IE38 97 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 VN1R5Q7Z5H4 357 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 FAM47BQ8NA70 645 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 FAM98AQ8NCA5 519 aaKnown RBP11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 MDS2Q8NDY4 140 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 WDR34Q96EX3 536 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 SERINC2Q96SA4 455 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 CD244Q9BZW8 370 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 CDCP1Q9H5V8 836 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 NECTIN3Q9NQS3 549 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 PRTFDC1Q9NRG1 225 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 LRFN1Q9P244 771 aa11.57□□□□□ -0.56
CTDNEP1-205ENST00000570828 TRGV8A0A0C4DH27 118 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 TRBV11-1A0A0K0K1C0 115 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 SYNDIG1LA6NDD5 238 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 SYCE1LA8MT33 242 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 CDK2AP1O14519 115 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 FCHO1O14526 889 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZG16O60844 167 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 SLC25A12O75746 678 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 MYO1DO94832 1006 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 CD22P20273 847 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 CERS1P27544 350 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 TPP2P29144 1249 aaPredicted RBP11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 PHBP35232 272 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 MSH2P43246 934 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 KCNC1P48547 511 aa11.56□□□□□ -0.56
CTDNEP1-205ENST00000570828 MTTPP55157 894 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms