RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 FBLP22087 321 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 HIST1H1TP22492 207 aaPredicted RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ALAS2P22557 587 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 TLX1P31314 330 aaPredicted RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 RPL3P39023 403 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 TSPAN7P41732 249 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 CLNS1AP54105 237 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 CLDN6P56747 220 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 EMX2Q04743 252 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 GABPB1Q06547 395 aaPredicted RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 IL11RAQ14626 422 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAPRE2Q15555 327 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 GSTA3Q16772 222 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ADPRMQ3LIE5 342 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 C6orf136Q5SQH8 315 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 DCAF12Q5T6F0 453 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ARHGAP40Q5TG30 622 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 IL23RQ5VWK5 629 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 METTL21CQ5VZV1 264 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR4C11Q6IEV9 310 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 NOXRED1Q6NXP6 359 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 FBXO42Q6P3S6 717 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ABHD17CQ6PCB6 329 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 Q6ZSR9 355 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 TTLL10Q6ZVT0 673 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 IKBIPQ70UQ0 350 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 LARP4Q71RC2 724 aaKnown RBP eCLIP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ALYREFQ86V81 257 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 TMPRSS12Q86WS5 348 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 MIER2Q8N344 545 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 METTL4Q8N3J2 472 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 TMEM132CQ8N3T6 1108 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 LIX1Q8N485 282 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 WDR36Q8NI36 951 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 PROKR1Q8TCW9 393 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 UTP15Q8TED0 518 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF501Q96CX3 271 aaPredicted RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 TM4SF19Q96DZ7 209 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 MVB12AQ96EY5 273 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 APIPQ96GX9 242 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 TSSK3Q96PN8 268 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 LRRC37BQ96QE4 947 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 TEFMQ96QE5 360 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 CTRCQ99895 268 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZPBPQ9BS86 351 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 YIPF2Q9BWQ6 316 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 SORBS1Q9BX66 1292 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ASPSCR1Q9BZE9 553 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ULBP3Q9BZM4 244 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 DPY30Q9C005 99 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ACTR5Q9H9F9 607 aaPredicted RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 GIMAP4Q9NUV9 329 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 AIG1Q9NVV5 245 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 SIDT1Q9NXL6 827 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ASIC5Q9NY37 505 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 HEY2Q9UBP5 337 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 MCM8Q9UJA3 840 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 CDC14AQ9UNH5 594 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAPRE3Q9UPY8 281 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 MRPS33Q9Y291 106 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 NAALAD2Q9Y3Q0 740 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLC22A7Q9Y694 548 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 CAPN7Q9Y6W3 813 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZFC3H1O60293 1989 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 PIKFYVEQ9Y2I7 2098 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 CUL9Q8IWT3 2517 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 MUC6Q6W4X9 2439 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 A0A0A6YYC8 382 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 A0A0A6YYD5 115 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 A0A1W2PNR3 127 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 FITM1A5D6W6 292 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 C9J4A7 227 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 I3L1I5 382 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 NR5A2O00482 541 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 FCHO1O14526 889 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF195O14628 629 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 DSCR3O14972 297 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLC22A2O15244 555 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF749O43361 778 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 HYAL3O43820 417 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ICMTO60725 284 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 GALR3O60755 368 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 RDH16O75452 317 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 EEDO75530 441 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 NSA2O95478 260 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 GBAP04062 536 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM58BPP0C7Q3 252 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRR35P0CG20 571 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 VSIG8P0DPA2 414 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 NR2F6P10588 404 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 PIM1P11309 404 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 BCKDHAP12694 445 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 COX7A2P14406 83 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 SDC1P18827 310 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 AGXTP21549 392 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 CPN2P22792 545 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 JAK1P23458 1154 aa6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 ATP5A1P25705 553 aaKnown RBP6.24□□□□□ -1.41
CTDNEP1-204ENST00000570484 NTSP30990 170 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms