RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 TGFBR3LH3BV60 316 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 GFYI3L273 518 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 NDUFS4O43181 175 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 EEF1E1O43324 174 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 ZNF189O75820 626 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 IFNA2P01563 188 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 RFPL3SP0C7P2 107 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 ZNF888P0CJ79 500 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 CCL3P10147 92 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 NID1P14543 1247 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 CYLC1P35663 651 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 SKIV2L2P42285 1042 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 TBPL1P62380 186 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 SKP1P63208 163 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 HECTD2Q5U5R9 776 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 PPP1R21Q6ZMI0 780 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 LACC1Q8IV20 430 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 GOLM1Q8NBJ4 401 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 OR8K1Q8NGG5 319 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 ASB11Q8WXH4 323 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 ISL2Q96A47 359 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 SGCZQ96LD1 299 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 CCL19Q99731 98 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 RHBGQ9H310 441 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 NHEJ1Q9H9Q4 299 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 ETNK1Q9HBU6 452 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 CCDC177Q9NQR7 707 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 TREX1Q9NSU2 369 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 SACM1LQ9NTJ5 587 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 SAMD15Q9P1V8 674 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 CRYL1Q9Y2S2 319 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 CLDN16Q9Y5I7 305 aa9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-202ENST00000570380 MED12Q93074 2177 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ROS1P08922 2347 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 PHF1O43189 567 aaPredicted RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 SIAH2O43255 324 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ZBTB14O43829 449 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 TJP3O95049 919 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ESR1P03372 595 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 P04436 131 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 SERPIND1P05546 499 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 CDH1P12830 882 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 RNH1P13489 461 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 CTSSP25774 331 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 CTNNA1P35221 906 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 GRK3P35626 688 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 PIGAP37287 484 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 CLCN7P51798 805 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 HK2P52789 917 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 PWP1Q13610 501 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 CAPRIN1Q14444 709 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 SIX1Q15475 284 aaPredicted RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ACKR1Q16570 336 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 HEPHL1Q6MZM0 1159 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 C11orf63Q6NUN7 778 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 NIPAL1Q6NVV3 410 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ADGRD1Q6QNK2 874 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 CYHR1Q6ZMK1 362 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ABHD13Q7L211 337 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 C17orf64Q86WR6 236 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 PRELID2Q8N945 189 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 PPHLN1Q8NEY8 458 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 NEIL3Q8TAT5 605 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 UTP15Q8TED0 518 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 CCDC42Q96M95 316 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 PCBD2Q9H0N5 130 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ZNF703Q9H7S9 590 aaPredicted RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 UBTD1Q9HAC8 227 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 CLK4Q9HAZ1 481 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ACKR4Q9NPB9 350 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 C6orf203Q9P0P8 240 aaPredicted RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 ADGRE2Q9UHX3 823 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 EIF3LQ9Y262 564 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 MMACHCQ9Y4U1 282 aa9.61□□□□□ -0.87
CTDNEP1-202ENST00000570380 GOLGA8KD6RF30 607 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 H3BMM5 538 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 GOLGA8TH3BQL2 631 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 PSMD12O00232 456 aaPredicted RBP9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 CASKO14936 926 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 OR1F1O43749 312 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 NPPBP16860 134 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 FPR1P21462 350 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 ARNTP27540 789 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 NMBRP28336 390 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 OPRM1P35372 400 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 TRPC1P48995 793 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 PTH2RP49190 550 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 ADARP55265 1226 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 RAB8AP61006 207 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 CRADDP78560 199 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 CRYZQ08257 329 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 DMTNQ08495 405 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 CUL1Q13616 776 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 PCID2Q5JVF3 399 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 RNF187Q5TA31 235 aaPredicted RBP9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 NSUN5P2Q63ZY6 315 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 KIAA0930Q6ICG6 404 aaPredicted RBP9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 HSDL2Q6YN16 418 aa9.6□□□□□ -0.87
CTDNEP1-202ENST00000570380 CLEC17AQ6ZS10 378 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms