RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SAYSD1Q9NPB0 183 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 NSMCE4AQ9NXX6 385 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 PABPN1LA6NDY0 278 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 FAM159BA6NKW6 160 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 ADAM10O14672 748 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 HNRNPRO43390 633 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 ERI3O43414 337 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 CD46P15529 392 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 GNAZP19086 355 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 CERS1P27544 350 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 TRHRP34981 398 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 PTGER1P34995 402 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 GGT5P36269 586 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 RFC3P40938 356 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 HSPA7P48741 367 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 HNMTP50135 292 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 ALDH6A1Q02252 535 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 ILF2Q12905 390 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 ZKSCAN8Q15776 578 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 TMIGD1Q6UXZ0 262 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 SLC34A3Q8N130 599 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 ZNF808Q8N4W9 903 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 TBC1D19Q8N5T2 526 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 FAM47BQ8NA70 645 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 MNS1Q8NEH6 495 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 SREK1Q8WXA9 508 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 GPR22Q99680 433 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 RBBP8Q99708 897 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 PPIEQ9UNP9 301 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 HRH3Q9Y5N1 445 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 NCKAP5O14513 1909 aa12.92□□□□□ -0.34
GTF3C1-211ENST00000569653 CCDC168Q8NDH2 2452 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 TRBV11-1A0A0K0K1C0 115 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 CYR61O00622 381 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 MYO1DO94832 1006 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 CCDC166P0CW27 439 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 HLCSP50747 726 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 PLA2G16P53816 162 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 PLTPP55058 493 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 TAS2R50P59544 299 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 POU4F1Q01851 419 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 DOC2AQ14183 400 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 EFTUD2Q15029 972 aaKnown RBP eCLIP12.91□□□□□ -0.343e-6■■■□□ 17.4
GTF3C1-211ENST00000569653 MAPKAPK3Q16644 382 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 UBAP2Q5T6F2 1119 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 ZDHHC24Q6UX98 284 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 ZNF793Q6ZN11 406 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 BNC2Q6ZN30 1099 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 FRA10AC1Q70Z53 315 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 MDGA2Q7Z553 956 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 CLNKQ7Z7G1 428 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 SPPL2CQ8IUH8 684 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 ZNF321PQ8N8H1 164 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 KIF18AQ8NI77 898 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 CDKL2Q92772 493 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 WDR34Q96EX3 536 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 UBXN10Q96LJ8 280 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 NT5DC2Q9H857 520 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 LIN28AQ9H9Z2 209 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 CLK4Q9HAZ1 481 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 PRDM7Q9NQW5 492 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 DEPPQ9NTK1 212 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 KCMF1Q9P0J7 381 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 PTBP2Q9UKA9 531 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 MMACHCQ9Y4U1 282 aa12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 KLF2Q9Y5W3 355 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-211ENST00000569653 HCFC1P51610 2035 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 A0A0G2JMM0 328 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 A0A1W2PPB8 328 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 A0A1W2PRS3 328 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 PINLYPA6NC86 204 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 KIR3DP1A8MWS1 328 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 PSMD12O00232 456 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 ASNA1O43681 348 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 ZNF500O60304 480 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 ZNF354AO60765 605 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 CLEC3AO75596 197 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 SNRPB2P08579 225 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 GSTA2P09210 222 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 HTR1EP28566 365 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 RAB38P57729 211 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 SKP1P63208 163 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 ZNF630Q2M218 657 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 XKR6Q5GH73 641 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 NIPAL1Q6NVV3 410 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 ABHD17CQ6PCB6 329 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 C3P1Q6ZMU1 363 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 CMC1Q7Z7K0 106 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 GPSM1Q86YR5 675 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 MCEMP1Q8IX19 187 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 TMEM178AQ8NBL3 297 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 PDPRQ8NCN5 879 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 B3GNT7Q8NFL0 401 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 FBXO25Q8TCJ0 367 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 CCT6BQ92526 530 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 NCLNQ969V3 563 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 F2RL3Q96RI0 385 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 PRTFDC1Q9NRG1 225 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms