RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 MICALCLQ6ZW33 695 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 PLEKHM3Q6ZWE6 761 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 GLT6D1Q7Z4J2 308 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 BTLAQ7Z6A9 289 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 ANKRD37Q7Z713 158 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 TMEM156Q8N614 296 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 AMER3Q8N944 861 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 OR5K2Q8NHB8 316 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 ANKRD7Q92527 254 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 ZBTB9Q96C00 473 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 EBNA1BP2Q99848 306 aaKnown RBP9.02□□□□□ -0.97
CAPN3-216ENST00000567071 IL22Q9GZX6 179 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 EPB41L4BQ9H329 900 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 CHRAC1Q9NRG0 131 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 STOX2Q9P2F5 926 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-216ENST00000567071 CRLS1Q9UJA2 301 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 PLAGL1Q9UM63 463 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 ARL5AQ9Y689 179 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 STX7O15400 261 aaKnown RBP9.01□□□□□ -0.97
CAPN3-216ENST00000567071 RIPK2O43353 540 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 SUSD5O60279 629 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 CTSVO60911 334 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 VPS26AO75436 327 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 IGHG3P01860 377 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 ROS1P08922 2347 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 ATP1B2P14415 290 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-216ENST00000567071 PKLRP30613 574 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 HSD17B3P37058 310 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 AVPR1BP47901 424 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 GPX6P59796 221 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 MSLNQ13421 630 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-216ENST00000567071 PTPRCAPQ14761 206 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 CRYMQ14894 314 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 NAA25Q14CX7 972 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 PCID2Q5JVF3 399 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 C6orf52Q5T4I8 152 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 NDUFAF5Q5TEU4 345 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 GARNL3Q5VVW2 1013 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 TRILQ7L0X0 811 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 TRMT10CQ7L0Y3 403 aaKnown RBP9.01□□□□□ -0.97
CAPN3-216ENST00000567071 OTOAQ7RTW8 1153 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 ZNF227Q86WZ6 799 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 HEATR5AQ86XA9 2040 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 MEX3DQ86XN8 651 aaKnown RBP9.01□□□□□ -0.97
CAPN3-216ENST00000567071 RELL1Q8IUW5 271 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 PALM2Q8IXS6 379 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 FBXW8Q8N3Y1 598 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 MREGQ8N565 214 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 ULK4Q96C45 1275 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 LRRC39Q96DD0 335 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 MFSD3Q96ES6 412 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 ZNF778Q96MU6 729 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 COPS8Q99627 209 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 DRC3Q9H069 523 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 PLAC1Q9HBJ0 212 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 TMEM160Q9NX00 188 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 SLC2A6Q9UGQ3 507 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 SOX13Q9UN79 622 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.01□□□□□ -0.97
CAPN3-216ENST00000567071 WNK1Q9H4A3 2382 aa9.01□□□□□ -0.97
CAPN3-216ENST00000567071 FREM1Q5H8C1 2179 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 A0A1B0GVC2 190 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 LIN7AO14910 233 aaPredicted RBP9□□□□□ -0.97
CAPN3-216ENST00000567071 SLC16A5O15375 505 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 SGTAO43765 313 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 TTC4O95801 387 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 PAX1P15863 534 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 ADRA1DP25100 572 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 CPA2P48052 419 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 ZNF140P52738 457 aaPredicted RBP9□□□□□ -0.97
CAPN3-216ENST00000567071 MLF1P58340 268 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 SLC26A5P58743 744 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 OCRLQ01968 901 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 TAP2Q03519 686 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 CAPRIN1Q14444 709 aaKnown RBP9□□□□□ -0.97
CAPN3-216ENST00000567071 USP10Q14694 798 aaKnown RBP9□□□□□ -0.97
CAPN3-216ENST00000567071 CASP8Q14790 479 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 EFTUD2Q15029 972 aaKnown RBP eCLIP9□□□□□ -0.97
CAPN3-216ENST00000567071 TAF1AQ15573 450 aaPredicted RBP9□□□□□ -0.97
CAPN3-216ENST00000567071 SYT16Q17RD7 645 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 ANKRD20A4Q4UJ75 823 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 SFT2D3Q587I9 215 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 SPANXN3Q5MJ09 141 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 TSTD2Q5T7W7 516 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 STEAP4Q687X5 459 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 TRMT10BQ6PF06 316 aaKnown RBP9□□□□□ -0.97
CAPN3-216ENST00000567071 GK5Q6ZS86 529 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 TAX1BP1Q86VP1 789 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9□□□□□ -0.97
CAPN3-216ENST00000567071 FAM109AQ8N4B1 249 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 OR13C4Q8NGS5 318 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 GSDMBQ8TAX9 411 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 KIAA1191Q96A73 305 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 HSPBAP1Q96EW2 488 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 DNAJC1Q96KC8 554 aaKnown RBP9□□□□□ -0.97
CAPN3-216ENST00000567071 NAT9Q9BTE0 207 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 CNPPD1Q9BV87 410 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 KIFC1Q9BW19 673 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 RBM24Q9BX46 236 aaKnown RBP9□□□□□ -0.97
CAPN3-216ENST00000567071 ERVK-11Q9UQG0 969 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms