RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 MSANTD1Q6ZTZ1 278 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 TICAM1Q8IUC6 712 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 EID2Q8N6I1 236 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 CSNK1A1LQ8N752 337 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 CAMKVQ8NCB2 501 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 UCN3Q969E3 161 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 TBCDQ9BTW9 1192 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 KCNH6Q9H252 994 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 FAM120CQ9NX05 1096 aaKnown RBP16.81■□□□□ 0.28
HERC2-208ENST00000566635 C5AR2Q9P296 337 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 CD300AQ9UGN4 299 aa16.81■□□□□ 0.28
HERC2-208ENST00000566635 SCN3AQ9NY46 2000 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 TRBV5-3A0A0A0MS03 114 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 GALR2O43603 387 aaPredicted RBP16.8■□□□□ 0.28
HERC2-208ENST00000566635 EPN2O95208 641 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 FAM58BPP0C7Q3 252 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 HOXB9P17482 250 aaPredicted RBP16.8■□□□□ 0.28
HERC2-208ENST00000566635 PTPN6P29350 595 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 GPR3P46089 330 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 ALDH9A1P49189 494 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 BTN3A2P78410 334 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 NR0B2Q15466 257 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 SAMD4BQ5PRF9 694 aaKnown RBP16.8■□□□□ 0.28
HERC2-208ENST00000566635 WASHC2DQ5SRD0 308 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 R3HCC1LQ7Z5L2 792 aaKnown RBP16.8■□□□□ 0.28
HERC2-208ENST00000566635 SPRED1Q7Z699 444 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 SRFBP1Q8NEF9 429 aaKnown RBP16.8■□□□□ 0.28
HERC2-208ENST00000566635 AURKBQ96GD4 344 aaPredicted RBP16.8■□□□□ 0.28
HERC2-208ENST00000566635 PRPF18Q99633 342 aaKnown RBP16.8■□□□□ 0.28
HERC2-208ENST00000566635 CCDC3Q9BQI4 270 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 RAB33BQ9H082 229 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 IKZF5Q9H5V7 419 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 MIEF1Q9NQG6 463 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 EPHA6Q9UF33 1036 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.8■□□□□ 0.28
HERC2-208ENST00000566635 ERVK-11Q9UQG0 969 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 PCDHB14Q9Y5E9 798 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 RP1P56715 2156 aa16.8■□□□□ 0.28
HERC2-208ENST00000566635 A0A096LPI6 279 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 RFXANKO14593 260 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 MS4A2Q01362 244 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 LRIF1Q5T3J3 769 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 USP53Q70EK8 1073 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 BHLHE41Q9C0J9 482 aaPredicted RBP16.79■□□□□ 0.28
HERC2-208ENST00000566635 COPS7BQ9H9Q2 264 aaPredicted RBP16.79■□□□□ 0.28
HERC2-208ENST00000566635 L3MBTL1Q9Y468 752 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 CPED1A4D0V7 1026 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 CPSF4O95639 269 aaKnown RBP16.79■□□□□ 0.28
HERC2-208ENST00000566635 C1QCP02747 245 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 SMIM10L1P0DMW3 83 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 ENGP17813 658 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 DDCP20711 480 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 CD1CP29017 333 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 MLLT3P42568 568 aaPredicted RBP16.79■□□□□ 0.28
HERC2-208ENST00000566635 ARFIP1P53367 373 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 ACTR3P61158 418 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 TGM3Q08188 693 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 DEFB134Q4QY38 66 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 PERM1Q5SV97 790 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 C6orf163Q5TEZ5 329 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 ZC3H14Q6PJT7 736 aaKnown RBP16.79■□□□□ 0.28
HERC2-208ENST00000566635 PRSS41Q7RTY9 318 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 MCATQ8IVS2 390 aaKnown RBP16.79■□□□□ 0.28
HERC2-208ENST00000566635 ZCCHC7Q8N3Z6 543 aaKnown RBP16.79■□□□□ 0.28
HERC2-208ENST00000566635 DNAJC22Q8N4W6 341 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 ZDHHC12Q96GR4 267 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 TCTN2Q96GX1 697 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 SMIM10Q96HG1 83 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 ANKRD27Q96NW4 1050 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 PANX1Q96RD7 426 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 PCDHAC1Q9H158 963 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 SOHLH2Q9NX45 425 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 FBXW2Q9UKT8 454 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 USP22Q9UPT9 525 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 ASB4Q9Y574 426 aa16.79■□□□□ 0.28
HERC2-208ENST00000566635 ERN1O75460 977 aaKnown RBP16.78■□□□□ 0.28
HERC2-208ENST00000566635 SCELO95171 688 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 ATP6V1G2O95670 118 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 SYPP08247 313 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 RPL3P39023 403 aaKnown RBP16.78■□□□□ 0.28
HERC2-208ENST00000566635 TSFMP43897 325 aaKnown RBP16.78■□□□□ 0.28
HERC2-208ENST00000566635 GPLD1P80108 840 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 SLC9A5Q14940 896 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 MRM1Q6IN84 353 aaKnown RBP16.78■□□□□ 0.28
HERC2-208ENST00000566635 TMEM214Q6NUQ4 689 aaKnown RBP16.78■□□□□ 0.28
HERC2-208ENST00000566635 HIPK4Q8NE63 616 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 MTERF3Q96E29 417 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 CCDC115Q96NT0 180 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 ATG4BQ9Y4P1 393 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 C15orf38-AP3S2A0A0A6YYH1 394 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 PRSS51A0A1B0GVH4 220 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 ZNF860A6NHJ4 632 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 ANP32DO95626 131 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 IL1RNP18510 177 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 TRA2BP62995 288 aaKnown RBP16.78■□□□□ 0.28
HERC2-208ENST00000566635 CCNIQ14094 377 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 HEPACAMQ14CZ8 416 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 RUNDC3AQ59EK9 446 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 SNAP47Q5SQN1 464 aa16.78■□□□□ 0.28
HERC2-208ENST00000566635 NDUFAF5Q5TEU4 345 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms