RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ZNF490Q9ULM2 529 aaPredicted RBP18.59■□□□□ 0.57
CLN6-206ENST00000565471 PPIEQ9UNP9 301 aaKnown RBP18.59■□□□□ 0.57
CLN6-206ENST00000565471 MRPS33Q9Y291 106 aaKnown RBP18.59■□□□□ 0.57
CLN6-206ENST00000565471 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLN6-206ENST00000565471 TRGV8A0A0C4DH27 118 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 CLDN4O14493 209 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 SLC35E2BP0CK96 405 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 CD22P20273 847 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 TRHRP34981 398 aaPredicted RBP18.58■□□□□ 0.56
CLN6-206ENST00000565471 CYB561P49447 251 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 ST13P50502 369 aaKnown RBP18.58■□□□□ 0.56
CLN6-206ENST00000565471 CLCN2P51788 898 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 PLA2G16P53816 162 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 MTTPP55157 894 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 ALDH6A1Q02252 535 aaKnown RBP18.58■□□□□ 0.56
CLN6-206ENST00000565471 SRSF11Q05519 484 aaKnown RBP18.58■□□□□ 0.56
CLN6-206ENST00000565471 TGM3Q08188 693 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 KRTCAP3Q53RY4 240 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 ZNF468Q5VIY5 522 aaPredicted RBP18.58■□□□□ 0.56
CLN6-206ENST00000565471 MTFR2Q6P444 385 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 ABHD17CQ6PCB6 329 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 GALNTL5Q7Z4T8 443 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 CCDC25Q86WR0 208 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 ZNF595Q8IYB9 648 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 FBF1Q8TES7 1133 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 GPR137Q96N19 417 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 DEFB126Q9BYW3 111 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 CD244Q9BZW8 370 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 NMRAL1Q9HBL8 299 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 SUCOQ9UBS9 1254 aaKnown RBP18.58■□□□□ 0.56
CLN6-206ENST00000565471 CLDN16Q9Y5I7 305 aa18.58■□□□□ 0.56
CLN6-206ENST00000565471 A8MUA0 341 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 FCHO1O14526 889 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 CCNT2O60583 730 aaKnown RBP18.57■□□□□ 0.56
CLN6-206ENST00000565471 SLC25A12O75746 678 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 FAM155BO75949 473 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 EPORP19235 508 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 CRABP2P29373 138 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 CASP2P42575 452 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 KCNC1P48547 511 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 HLCSP50747 726 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 IRF8Q02556 426 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 GUCY2DQ02846 1103 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 CHIT1Q13231 466 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 RCN2Q14257 317 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 SLMAPQ14BN4 828 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 TRADDQ15628 312 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 HIST2H2ACQ16777 129 aaPredicted RBP18.57■□□□□ 0.56
CLN6-206ENST00000565471 HIST2H2AA3Q6FI13 130 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 RAPH1Q70E73 1250 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 CMC1Q7Z7K0 106 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 TBC1D1Q86TI0 1168 aaPredicted RBP18.57■□□□□ 0.56
CLN6-206ENST00000565471 ISCA2Q86U28 154 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 C17orf53Q8N3J3 647 aaPredicted RBP18.57■□□□□ 0.56
CLN6-206ENST00000565471 UBTD2Q8WUN7 234 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 ALG9Q9H6U8 611 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 COPS7BQ9H9Q2 264 aaPredicted RBP18.57■□□□□ 0.56
CLN6-206ENST00000565471 DAPP1Q9UN19 280 aa18.57■□□□□ 0.56
CLN6-206ENST00000565471 TRBV11-1A0A0K0K1C0 115 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 CCL21O00585 134 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 NME2P1O60361 137 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 SLC19A2O60779 497 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 KERAO60938 352 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 MYO1DO94832 1006 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 LTA4HP09960 611 aaKnown RBP18.56■□□□□ 0.56
CLN6-206ENST00000565471 TFEBP19484 476 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 NME2P22392 152 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 CASP6P55212 293 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 LIM2P55344 173 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 PCDH1Q08174 1060 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 DLG1Q12959 904 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 SLC13A2Q13183 592 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 ADNP2Q6IQ32 1131 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 CCDC91Q7Z6B0 441 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 ZNF227Q86WZ6 799 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 TMEM52Q8NDY8 209 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 SRFBP1Q8NEF9 429 aaKnown RBP18.56■□□□□ 0.56
CLN6-206ENST00000565471 EXT2Q93063 718 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 UBE2E3Q969T4 207 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 VMP1Q96GC9 406 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 ATOH8Q96SQ7 321 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 ROGDIQ9GZN7 287 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 ADAP2Q9NPF8 381 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 PRDM7Q9NQW5 492 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 PNO1Q9NRX1 252 aaKnown RBP18.56■□□□□ 0.56
CLN6-206ENST00000565471 IGSF5Q9NSI5 407 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 ENTPD4Q9Y227 616 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 ASB1Q9Y576 335 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 NOTCH2Q04721 2471 aa18.56■□□□□ 0.56
CLN6-206ENST00000565471 TGFBR3LH3BV60 316 aa18.55■□□□□ 0.56
CLN6-206ENST00000565471 CYR61O00622 381 aa18.55■□□□□ 0.56
CLN6-206ENST00000565471 WISP2O76076 250 aa18.55■□□□□ 0.56
CLN6-206ENST00000565471 CERS1P27544 350 aa18.55■□□□□ 0.56
CLN6-206ENST00000565471 GMPRP36959 345 aa18.55■□□□□ 0.56
CLN6-206ENST00000565471 GPR143P51810 404 aa18.55■□□□□ 0.56
CLN6-206ENST00000565471 HNRNPFP52597 415 aaKnown RBP18.55■□□□□ 0.56
CLN6-206ENST00000565471 ART3Q13508 389 aa18.55■□□□□ 0.56
CLN6-206ENST00000565471 EFTUD2Q15029 972 aaKnown RBP eCLIP18.55■□□□□ 0.56
CLN6-206ENST00000565471 MAPKAPK3Q16644 382 aa18.55■□□□□ 0.56
CLN6-206ENST00000565471 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms