RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 GPR78Q96P69 363 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 CD244Q9BZW8 370 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 TSPAN10Q9H1Z9 355 aaPredicted RBP13.75□□□□□ -0.21
USB1-210ENST00000565151 EHD1Q9H4M9 534 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 CLK4Q9HAZ1 481 aaKnown RBP13.75□□□□□ -0.21
USB1-210ENST00000565151 CD274Q9NZQ7 290 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 KCMF1Q9P0J7 381 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 TEKT2Q9UIF3 430 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 UTP11Q9Y3A2 253 aaKnown RBP13.75□□□□□ -0.21
USB1-210ENST00000565151 PCDHGB6Q9Y5F9 930 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 ADGRG4Q8IZF6 3080 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 ASPDHA6ND91 283 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 TMEM200CA6NKL6 621 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 RTCAO00442 366 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 SP1P08047 785 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 CERS1P27544 350 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 SPRP35270 261 aaPredicted RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 CASP2P42575 452 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 NR0B1P51843 470 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 LIM2P55344 173 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 STXBP1P61764 594 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 ZRSR2Q15696 482 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 PDK4Q16654 411 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 XKR6Q5GH73 641 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 GFRALQ6UXV0 394 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 RPS19BP1Q86WX3 136 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 SIAH3Q8IW03 269 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 FAM47BQ8NA70 645 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 NOA1Q8NC60 698 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 OR2L5Q8NG80 312 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 DNAJB8Q8NHS0 232 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 ZNF473Q8WTR7 871 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 KCTD4Q8WVF5 259 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 CCT6BQ92526 530 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 FRMD6Q96NE9 622 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 UTP23Q9BRU9 249 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 TXNDC16Q9P2K2 825 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 DMGDHQ9UI17 866 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 RNF112Q9ULX5 631 aa13.74□□□□□ -0.21
USB1-210ENST00000565151 PPIEQ9UNP9 301 aaKnown RBP13.74□□□□□ -0.21
USB1-210ENST00000565151 NINQ8N4C6 2090 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 EXPH5Q8NEV8 1989 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 URADA6NGE7 173 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 CCNT2O60583 730 aaKnown RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 SH3BGRLO75368 114 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 C2P06681 752 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 RAB38P57729 211 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 CAV1Q03135 178 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 CHIT1Q13231 466 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 SLMAPQ14BN4 828 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 TBCCQ15814 346 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 MROH9Q5TGP6 573 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 NIPAL1Q6NVV3 410 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 GALNTL5Q7Z4T8 443 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 FGD2Q7Z6J4 655 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 CLNKQ7Z7G1 428 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 LGI4Q8N135 537 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 KRT78Q8N1N4 520 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 PLD6Q8N2A8 252 aaKnown RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 SLC5A8Q8N695 610 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 ZNF321PQ8N8H1 164 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 THAP3Q8WTV1 239 aaPredicted RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 MRRFQ96E11 262 aaKnown RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 PTCD3Q96EY7 689 aaKnown RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 SORBS1Q9BX66 1292 aaKnown RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 NPLQ9BXD5 320 aaPredicted RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 MS4A8Q9BY19 250 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 REXO4Q9GZR2 422 aaKnown RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 RAB17Q9H0T7 212 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 TRIM45Q9H8W5 580 aaPredicted RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 LIN28AQ9H9Z2 209 aaKnown RBP13.73□□□□□ -0.21
USB1-210ENST00000565151 NINJ2Q9NZG7 142 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 LRFN1Q9P244 771 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 SEC14L3Q9UDX4 400 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 DAPP1Q9UN19 280 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 MMACHCQ9Y4U1 282 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 NOTCH2Q04721 2471 aa13.73□□□□□ -0.21
USB1-210ENST00000565151 ANKDD1BA6NHY2 528 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 CLGNO14967 610 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 ZNF354AO60765 605 aaPredicted RBP13.72□□□□□ -0.21
USB1-210ENST00000565151 KERAO60938 352 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 MYO1DO94832 1006 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 ECHS1P30084 290 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 STX2P32856 288 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 SKP1P63208 163 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 OC90Q02509 493 aaPredicted RBP13.72□□□□□ -0.21
USB1-210ENST00000565151 PCDH1Q08174 1060 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 CDSNQ15517 529 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 FAM219BQ5XKK7 198 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 LRRC70Q7Z2Q7 622 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.72□□□□□ -0.21
USB1-210ENST00000565151 B3GNT7Q8NFL0 401 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 TTLQ8NG68 377 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 STAG3L4Q8TBR4 150 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 UBTD2Q8WUN7 234 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 ITLN2Q8WWU7 325 aaPredicted RBP13.72□□□□□ -0.21
USB1-210ENST00000565151 SREK1Q8WXA9 508 aaKnown RBP13.72□□□□□ -0.21
USB1-210ENST00000565151 MAPKAP1Q9BPZ7 522 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 CAPS2Q9BXY5 557 aa13.72□□□□□ -0.21
USB1-210ENST00000565151 PITHD1Q9GZP4 211 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms