RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 UBE2E3Q969T4 207 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 PTCD3Q96EY7 689 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 VMP1Q96GC9 406 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 UBXN10Q96LJ8 280 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 GPR22Q99680 433 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 CCDC77Q9BR77 488 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 EFCAB11Q9BUY7 163 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 REXO4Q9GZR2 422 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 PRTFDC1Q9NRG1 225 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 PTBP2Q9UKA9 531 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 NPIPA1Q9UND3 350 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 KLF13Q9Y2Y9 288 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 MTO1Q9Y2Z2 717 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 GTF3C1Q12789 2109 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 CTAGE15A4D2H0 777 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 FAM159BA6NKW6 160 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 TAPBPO15533 448 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 ERI3O43414 337 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 CTNSO60931 367 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 ZFAND5O76080 213 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 CD1DP15813 335 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 TFEBP19484 476 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 HTR1EP28566 365 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 SERPINB1P30740 379 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 SSTR1P30872 391 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 SPRP35270 261 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 GPR143P51810 404 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 MTTPP55157 894 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 RAB10P61026 200 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 PCDH1Q08174 1060 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 BIKQ13323 160 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 RUNX2Q13950 521 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 SLBPQ14493 270 aaKnown RBP eCLIP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 PDK4Q16654 411 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 ABHD17CQ6PCB6 329 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 CCDC91Q7Z6B0 441 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 CTAGE6Q86UF2 777 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 TMEM156Q8N614 296 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 APCDD1LQ8NCL9 501 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 PDPRQ8NCN5 879 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 SPATA4Q8NEY3 305 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 CCT6BQ92526 530 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 DAZLQ92904 295 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 PDLIM2Q96JY6 352 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 QRFPRQ96P65 431 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 RBBP8Q99708 897 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 AICDAQ9GZX7 198 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 NMRAL1Q9HBL8 299 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 LYRM4Q9HD34 91 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 SAYSD1Q9NPB0 183 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 ADAP2Q9NPF8 381 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 SMYD2Q9NRG4 433 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 RYDENQ9NUL5 291 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 WWOXQ9NZC7 414 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 ZNF490Q9ULM2 529 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 YARS2Q9Y2Z4 477 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 MEMO1Q9Y316 297 aa11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 UTP11Q9Y3A2 253 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-204ENST00000564664 TCRBV9S1A1TA0A576 114 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 ARHGAP10A1A4S6 786 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 CXorf49A8MYA2 514 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 CYR61O00622 381 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 PRRG2O14669 202 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 MYO1DO94832 1006 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 S100BP04271 92 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 ZNF24P17028 368 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 CRABP2P29373 138 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 KCNC1P48547 511 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 LIM2P55344 173 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 SLC13A2Q13183 592 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 NAB1Q13506 487 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 E2F2Q14209 437 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 ELAVL1Q15717 326 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 ZKSCAN8Q15776 578 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 C3AR1Q16581 482 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 TMEM35AQ53FP2 167 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 XKR6Q5GH73 641 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 ZNF468Q5VIY5 522 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 LRRC70Q7Z2Q7 622 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 ZNF227Q86WZ6 799 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 C16orf52Q8NHV5 167 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 PHF10Q8WUB8 498 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 KCNC2Q96PR1 638 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 TBCDQ9BTW9 1192 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 HES7Q9BYE0 225 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 CD244Q9BZW8 370 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 TIMMDC1Q9NPL8 285 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 CD274Q9NZQ7 290 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 VTI1BQ9UEU0 232 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 ADGRE2Q9UHX3 823 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 DAPP1Q9UN19 280 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 SPACA6W5XKT8 324 aa11.37□□□□□ -0.59
GTF3C1-204ENST00000564664 TRBV11-1A0A0K0K1C0 115 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 NCF1BA6NI72 391 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 A8MUA0 341 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 NCF1CA8MVU1 366 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 C4orf51C9J302 202 aa11.36□□□□□ -0.59
GTF3C1-204ENST00000564664 E9PLN8 166 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms