RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 VIPAS39Q9H9C1 493 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ZCCHC3Q9NUD5 404 aaKnown RBP4.02□□□□□ -1.77
LINC00560-201ENST00000564593 LNPEPQ9UIQ6 1025 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 FOXA2Q9Y261 457 aaPredicted RBP4.02□□□□□ -1.77
LINC00560-201ENST00000564593 EFCAB5A4FU69 1503 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 CFAP43Q8NDM7 1665 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 RAPGEF2Q9Y4G8 1499 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 A0A0U1RQG5 324 aaPredicted RBP4.02□□□□□ -1.77
LINC00560-201ENST00000564593 SLC15A5A6NIM6 579 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 NPIPB9F8W1W9 429 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 PSMD3O43242 534 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ZG16O60844 167 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 SOCS5O75159 536 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 CEACAM4O75871 244 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 GSTA2P09210 222 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 EZRP15311 586 aaKnown RBP4.02□□□□□ -1.77
LINC00560-201ENST00000564593 C4BPBP20851 252 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 PRKACGP22612 351 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 NT5C2P49902 561 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ATP12AP54707 1039 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 IRX4P78413 519 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 GFPT1Q06210 699 aaPredicted RBP4.02□□□□□ -1.77
LINC00560-201ENST00000564593 PDE7AQ13946 482 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 BSPRYQ5W0U4 402 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ETFRF1Q6IPR1 90 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 TMEM64Q6YI46 380 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ZER1Q7Z7L7 766 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ZNF410Q86VK4 478 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 CATSPERDQ86XM0 798 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ELMOD1Q8N336 334 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 RPLP0P6Q8NHW5 317 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ZNF519Q8TB69 540 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 SMPDL3AQ92484 453 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 SLCO2A1Q92959 643 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 CCDC47Q96A33 483 aaKnown RBP4.02□□□□□ -1.77
LINC00560-201ENST00000564593 EEF2KMTQ96G04 330 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 GUCD1Q96NT3 240 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ASCL2Q99929 193 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 PAPOLGQ9BWT3 736 aaKnown RBP4.02□□□□□ -1.77
LINC00560-201ENST00000564593 B3GAT2Q9NPZ5 323 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 MOSPD1Q9UJG1 213 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 APPL1Q9UKG1 709 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 PILRAQ9UKJ1 303 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 ERVK-19Q9WJR5 959 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 KCNK6Q9Y257 313 aa4.02□□□□□ -1.77
LINC00560-201ENST00000564593 CUX1P39880 1505 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 FHAD1B1AJZ9 1412 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 SYCE3A1L190 88 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 LMO7DNF2Z398 122 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 ECE2O60344 883 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 GMNNO75496 209 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 ZFAND5O76080 213 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 CHRNGP07510 517 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 NUDT17P0C025 328 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 ACKR3P25106 362 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 CYCSP99999 105 aaKnown RBP4.01□□□□□ -1.77
LINC00560-201ENST00000564593 GALK2Q01415 458 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 DHODHQ02127 395 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 GIT2Q14161 759 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 SPHARQ15513 63 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 FAM189A2Q15884 450 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 PLPP4Q5VZY2 271 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 SNRNP48Q6IEG0 339 aaKnown RBP4.01□□□□□ -1.77
LINC00560-201ENST00000564593 Q6ZTC4 211 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 Q6ZVQ6 151 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 DND1Q8IYX4 353 aaKnown RBP4.01□□□□□ -1.77
LINC00560-201ENST00000564593 RTL3Q8N8U3 475 aaKnown RBP4.01□□□□□ -1.77
LINC00560-201ENST00000564593 TRPV3Q8NET8 790 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 GANCQ8TET4 914 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 TRIM7Q9C029 511 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 WWTR1Q9GZV5 400 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 ZNF665Q9H7R5 613 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 MED20Q9H944 212 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 HMG20BQ9P0W2 317 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 ZNF319Q9P2F9 582 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 EXOC7Q9UPT5 735 aa4.01□□□□□ -1.77
LINC00560-201ENST00000564593 EXOGQ9Y2C4 368 aaKnown RBP4.01□□□□□ -1.77
LINC00560-201ENST00000564593 TDRKHQ9Y2W6 561 aaKnown RBP4.01□□□□□ -1.77
LINC00560-201ENST00000564593 DNMBPQ6XZF7 1577 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 LAMC3Q9Y6N6 1575 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 SERINC4A6NH21 518 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 SIGLEC5O15389 551 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 ZBTB14O43829 449 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 PRDM1O75626 825 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 RPLP0P05388 317 aaKnown RBP4□□□□□ -1.77
LINC00560-201ENST00000564593 ANPEPP15144 967 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 MYOGP15173 224 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 UGT1A6P19224 532 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 GPR183P32249 361 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 HUNKP57058 714 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 YBEYP58557 167 aaPredicted RBP4□□□□□ -1.77
LINC00560-201ENST00000564593 C3AR1Q16581 482 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 MTHFSDQ2M296 383 aaKnown RBP4□□□□□ -1.77
LINC00560-201ENST00000564593 Q71RC1 249 aaPredicted RBP4□□□□□ -1.77
LINC00560-201ENST00000564593 RABEPKQ7Z6M1 372 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 FBXW8Q8N3Y1 598 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 CHCHD4Q8N4Q1 142 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 ZNF614Q8N883 585 aa4□□□□□ -1.77
LINC00560-201ENST00000564593 NUP37Q8NFH4 326 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms