RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 C2CD4DB7Z1M9 353 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 F5H6K3 240 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 FPGTO14772 594 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 EPHB6O15197 1021 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 RTL8CO15255 209 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 CTAGE5O15320 804 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 RNASEH1O60930 286 aaKnown RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 LRCH4O75427 683 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 SLC25A27O95847 323 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 TRUB2O95900 331 aaKnown RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 SLC2A2P11168 524 aaPredicted RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 GP9P14770 177 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 ARL3P36405 182 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 MNDAP41218 407 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 RPS9P46781 194 aaKnown RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 CLCN4P51793 760 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 DEFB103AP81534 67 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 CDK3Q00526 305 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 SETQ01105 290 aaPredicted RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 CSTF1Q05048 431 aaKnown RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 LMOD3Q0VAK6 560 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 TCP10Q12799 353 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 AIMP1Q12904 312 aaKnown RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 COG2Q14746 738 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 C15orf32Q32M92 178 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 ELFN2Q5R3F8 820 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 LYSMD4Q5XG99 296 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 SNRNP48Q6IEG0 339 aaKnown RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 CDC42EP5Q6NZY7 148 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 HAUS6Q7Z4H7 955 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 MCEMP1Q8IX19 187 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 OR13C3Q8NGS6 347 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 MOSPD2Q8NHP6 518 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 GATAD1Q8WUU5 269 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 APOBEC4Q8WW27 367 aaKnown RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 TOP1MTQ969P6 601 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 CNRIP1Q96F85 164 aaPredicted RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 ATXN7L3BQ96GX2 97 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 SLC45A3Q96JT2 553 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 C12orf42Q96LP6 360 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 CCDC3Q9BQI4 270 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 TRPV6Q9H1D0 765 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 TLE6Q9H808 572 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 MED20Q9H944 212 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 Q9N2K0 584 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 FAM207AQ9NSI2 230 aaPredicted RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 MYH9P35579 1960 aaKnown RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 ADGRG4Q8IZF6 3080 aa1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 MAP1AP78559 2803 aaPredicted RBP1.94□□□□□ -2.1
SUB1P3-201ENST00000564581 MYH6P13533 1939 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 PLXND1Q9Y4D7 1925 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 CADP27708 2225 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 ANKUB1A6NFN9 424 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 SNURFLB1AK76 121 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 B4E171 279 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 WDR46O15213 610 aaKnown RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 GLRA3O75311 464 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 MED24O75448 989 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 CDK2AP2O75956 126 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 SNAI1O95863 264 aaPredicted RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 THEGLP0DJG4 465 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 IL4RP24394 825 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 COPB2P35606 906 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 ETV5P41161 510 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 TSPAN7P41732 249 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 MFAP4P55083 255 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 MPP1Q00013 466 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 MAMLD1Q13495 774 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 SIM2Q14190 667 aaPredicted RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 GPNMBQ14956 572 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 EXT1Q16394 746 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 ODF4Q2M2E3 257 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 LCN1P1Q5VSP4 162 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 UGT3A1Q6NUS8 523 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 TATDN1Q6P1N9 297 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 TMCO3Q6UWJ1 677 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 CXCL17Q6UXB2 119 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 GDPGP1Q6ZNW5 385 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 FAM43BQ6ZT52 329 aaPredicted RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 TMPRSS11BQ86T26 416 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 SLC25A42Q86VD7 318 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 TDRD5Q8NAT2 981 aaKnown RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 NAXEQ8NCW5 288 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 LRRC15Q8TF66 581 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 CLDN23Q96B33 292 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 FAM218AQ96MZ4 157 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 CDRT15Q96T59 188 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 THUMPD2Q9BTF0 503 aaKnown RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 SPATC1LQ9H0A9 340 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 PRORYQ9H606 182 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 CHST11Q9NPF2 352 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 OLA1Q9NTK5 396 aaKnown RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 THAP10Q9P2Z0 257 aaPredicted RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 BARX2Q9UMQ3 279 aaPredicted RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 STUB1Q9UNE7 303 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 CELA1Q9UNI1 258 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 STYXL1Q9Y6J8 313 aa1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 FLNAP21333 2647 aaKnown RBP1.93□□□□□ -2.1
SUB1P3-201ENST00000564581 TNRC6BQ9UPQ9 1833 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms