RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 ROGDIQ9GZN7 287 aa17.7■□□□□ 0.42
FANCA-212ENST00000563513 WDR55Q9H6Y2 383 aaPredicted RBP17.7■□□□□ 0.42
FANCA-212ENST00000563513 CLK4Q9HAZ1 481 aaKnown RBP17.7■□□□□ 0.42
FANCA-212ENST00000563513 LRTM1Q9HBL6 345 aa17.7■□□□□ 0.42
FANCA-212ENST00000563513 C1orf109Q9NX04 203 aa17.7■□□□□ 0.42
FANCA-212ENST00000563513 ADAM29Q9UKF5 820 aa17.7■□□□□ 0.42
FANCA-212ENST00000563513 NCOR2Q9Y618 2525 aa17.7■□□□□ 0.42
FANCA-212ENST00000563513 AHCTF1Q8WYP5 2266 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 TERTO14746 1132 aaKnown RBP17.69■□□□□ 0.42
FANCA-212ENST00000563513 B3GALT2O43825 422 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 CNOT3O75175 753 aaKnown RBP17.69■□□□□ 0.42
FANCA-212ENST00000563513 PEX11AO75192 247 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 SEC22BO75396 215 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 CCNYL3P0C7X3 344 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 ATXN8OSP0DMR3 200 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 AGXTP21549 392 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 LSP1P33241 339 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 LIM2P55344 173 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 SLAMF1Q13291 335 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 TGIF1Q15583 401 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 SPIN4Q56A73 249 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 MRPL14Q6P1L8 145 aaKnown RBP17.69■□□□□ 0.42
FANCA-212ENST00000563513 FAM198BQ6UWH4 519 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 OVCH1Q7RTY7 1134 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 NUDT13Q86X67 352 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 ESX1Q8N693 406 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 OR51Q1Q8NH59 317 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 TUBGCP3Q96CW5 907 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 THOC1Q96FV9 657 aaKnown RBP17.69■□□□□ 0.42
FANCA-212ENST00000563513 MAPKAP1Q9BPZ7 522 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 KCNK13Q9HB14 408 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 PFDN4Q9NQP4 134 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 HCN3Q9P1Z3 774 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 DAPP1Q9UN19 280 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 MAP4K5Q9Y4K4 846 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 ASB4Q9Y574 426 aa17.69■□□□□ 0.42
FANCA-212ENST00000563513 ASPMQ8IZT6 3477 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 IGLV3-12A0A075B6K2 115 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 A0A088AWK7 358 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 TRPC5OSA6NMA1 111 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 TLX3O43711 291 aaPredicted RBP17.68■□□□□ 0.42
FANCA-212ENST00000563513 ZNF10P21506 573 aaPredicted RBP17.68■□□□□ 0.42
FANCA-212ENST00000563513 FBLP22087 321 aaKnown RBP17.68■□□□□ 0.42
FANCA-212ENST00000563513 EPHA3P29320 983 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 IDH3AP50213 366 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 SEC24CP53992 1094 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 FOXL2P58012 376 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 ACSM2AQ08AH3 577 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 GALNTL6Q49A17 601 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 ARHGAP40Q5TG30 622 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 ACSM2BQ68CK6 577 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 NOXRED1Q6NXP6 359 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 PAGE2Q7Z2X7 111 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 RFWD2Q8NHY2 731 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 CT55Q8WUE5 264 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 PPP3R2Q96LZ3 170 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 EBF4Q9BQW3 602 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 COPS7BQ9H9Q2 264 aaPredicted RBP17.68■□□□□ 0.42
FANCA-212ENST00000563513 RIC8BQ9NVN3 520 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 IFT80Q9P2H3 777 aaPredicted RBP17.68■□□□□ 0.42
FANCA-212ENST00000563513 DKK4Q9UBT3 224 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 CTSFQ9UBX1 484 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 MCM8Q9UJA3 840 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 DLGAP4Q9Y2H0 992 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 CEP295Q9C0D2 2601 aa17.68■□□□□ 0.42
FANCA-212ENST00000563513 GOLGA8QA0A0J9YX86 632 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 LOC101059948A0A1B0GTJ6 334 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 GOLGA8OA6NCC3 632 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 VSTM2BA6NLU5 285 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 FAM227AF5H4B4 570 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 GOLGA8NF8WBI6 632 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 CYR61O00622 381 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 FAM58BPP0C7Q3 252 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 LIPCP11150 499 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 PIM1P11309 404 aaPredicted RBP17.67■□□□□ 0.42
FANCA-212ENST00000563513 F8A1P23610 371 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 TIA1P31483 386 aaKnown RBP eCLIP17.67■□□□□ 0.42
FANCA-212ENST00000563513 STAT5AP42229 794 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 AQP5P55064 265 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 HNRNPH2P55795 449 aaKnown RBP17.67■□□□□ 0.42
FANCA-212ENST00000563513 SKP1P63208 163 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 GNGT1P63211 74 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 NKG7Q16617 165 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 VWA2Q5GFL6 755 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 CCNYL2Q5T2Q4 361 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 RIPOR1Q6ZS17 1223 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 ZC3H7AQ8IWR0 971 aaKnown RBP17.67■□□□□ 0.42
FANCA-212ENST00000563513 CACNA2D3Q8IZS8 1091 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.67■□□□□ 0.42
FANCA-212ENST00000563513 FGF11Q92914 225 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 TM4SF18Q96CE8 201 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 CHMP6Q96FZ7 201 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 PEX11GQ96HA9 241 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 OR52B2Q96RD2 323 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 EBPLQ9BY08 206 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 TGIF2Q9GZN2 237 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 SLC26A1Q9H2B4 701 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 LYRM4Q9HD34 91 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 TRPC4Q9UBN4 977 aa17.67■□□□□ 0.42
FANCA-212ENST00000563513 ATG4BQ9Y4P1 393 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms