RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 KCNK9Q9NPC2 374 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 SLC17A7Q9P2U7 560 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 PLEKHB1Q9UF11 243 aaPredicted RBP14.81□□□□□ -0.04
USB1-208ENST00000563207 ERRFI1Q9UJM3 462 aaPredicted RBP14.81□□□□□ -0.04
USB1-208ENST00000563207 CDC14AQ9UNH5 594 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 RUVBL1Q9Y265 456 aaKnown RBP14.81□□□□□ -0.04
USB1-208ENST00000563207 MRPS2Q9Y399 296 aaKnown RBP14.81□□□□□ -0.04
USB1-208ENST00000563207 BIRC5O15392 142 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 P2RX6O15547 441 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 CELA2AP08217 269 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 ZGLP1P0C6A0 271 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 CD22P20273 847 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 NAGLUP54802 743 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 PKNOX1P55347 436 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 MAGOHP61326 146 aaKnown RBP14.8□□□□□ -0.04
USB1-208ENST00000563207 SKP1P63208 163 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 SRSF11Q05519 484 aaKnown RBP14.8□□□□□ -0.04
USB1-208ENST00000563207 LCP2Q13094 533 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 RBBP7Q16576 425 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 C4orf17Q53FE4 359 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 FAAH2Q6GMR7 532 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 MILR1Q7Z6M3 343 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 HPS6Q86YV9 775 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 C10orf107Q8IVU9 208 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 ANKRD53Q8N9V6 530 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 CATSPER1Q8NEC5 780 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 THOC3Q96J01 351 aaKnown RBP14.8□□□□□ -0.04
USB1-208ENST00000563207 CNDP1Q96KN2 507 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 ATP6V1G3Q96LB4 118 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 ZNF382Q96SR6 550 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 MACROD1Q9BQ69 325 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 CRB3Q9BUF7 120 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 C12orf65Q9H3J6 166 aaKnown RBP14.8□□□□□ -0.04
USB1-208ENST00000563207 ZNF160Q9HCG1 818 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 SEMA4BQ9NPR2 832 aaPredicted RBP14.8□□□□□ -0.04
USB1-208ENST00000563207 PSD3Q9NYI0 1048 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 ZNF490Q9ULM2 529 aaPredicted RBP14.8□□□□□ -0.04
USB1-208ENST00000563207 PCDHGA10Q9Y5H3 936 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 SLC22A7Q9Y694 548 aa14.8□□□□□ -0.04
USB1-208ENST00000563207 NDUFS4O43181 175 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 ATP8B1O43520 1251 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 ALPPP05187 535 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 BPGMP07738 259 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 SERPINB5P36952 375 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 ARL1P40616 181 aaPredicted RBP14.79□□□□□ -0.04
USB1-208ENST00000563207 PIK3CBP42338 1070 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 CDH13P55290 713 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 STXBP1P61764 594 aaKnown RBP14.79□□□□□ -0.04
USB1-208ENST00000563207 PHEXP78562 749 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 GALNT1Q10472 559 aaPredicted RBP14.79□□□□□ -0.04
USB1-208ENST00000563207 TRAF3Q13114 568 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 TUBB8Q3ZCM7 444 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 TMEM214Q6NUQ4 689 aaKnown RBP14.79□□□□□ -0.04
USB1-208ENST00000563207 LINC00696Q6ZRV3 163 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 FRMD7Q6ZUT3 714 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 ZADH2Q8N4Q0 377 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 ARHGEF39Q8N4T4 335 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 CCNYL1Q8N7R7 359 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 AMER3Q8N944 861 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 OR7G3Q8NG95 312 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 OR52B6Q8NGF0 335 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 TRPC4APQ8TEL6 797 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 NSUN5Q96P11 429 aaKnown RBP14.79□□□□□ -0.04
USB1-208ENST00000563207 GSTO2Q9H4Y5 243 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 TRPS1Q9UHF7 1281 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 C3orf18Q9UK00 162 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 PPT2Q9UMR5 302 aa14.79□□□□□ -0.04
USB1-208ENST00000563207 COPG1Q9Y678 874 aaKnown RBP14.79□□□□□ -0.04
USB1-208ENST00000563207 HIVEP3Q5T1R4 2406 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 CRYBG3Q68DQ2 2970 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 HMGB1P1B2RPK0 211 aaPredicted RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 FOXS1O43638 330 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 NPHS1O60500 1241 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 IGHEP01854 428 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 DHRS4L1P0CG22 281 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 FBLP22087 321 aaKnown RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 ALDH3A1P30838 453 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 SERPINB4P48594 390 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 MAT1AQ00266 395 aaKnown RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 EEF1A2Q05639 463 aaKnown RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 ZNF33BQ06732 778 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 HERC3Q15034 1050 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 IGFL2Q6UWQ7 119 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 GPRIN3Q6ZVF9 776 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 ABHD13Q7L211 337 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 MYLK4Q86YV6 388 aaPredicted RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 NUDCD3Q8IVD9 361 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.78□□□□□ -0.04
USB1-208ENST00000563207 SRFBP1Q8NEF9 429 aaKnown RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 OR4F6Q8NGB9 312 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 CREB3L4Q8TEY5 395 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 MIEF2Q96C03 454 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 BARD1Q99728 777 aaKnown RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 YIPF2Q9BWQ6 316 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 SLC6A16Q9GZN6 736 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 CLK4Q9HAZ1 481 aaKnown RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 SEMA3GQ9NS98 782 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 ZNF282Q9UDV7 671 aaPredicted RBP14.78□□□□□ -0.04
USB1-208ENST00000563207 RNF11Q9Y3C5 154 aa14.78□□□□□ -0.04
USB1-208ENST00000563207 SPTAN1Q13813 2472 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms