RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 OR52J3Q8NH60 311 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 SETD7Q8WTS6 366 aaKnown RBP12.53□□□□□ -0.4
USB1-207ENST00000563149 ZNF480Q8WV37 535 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 OR51E2Q9H255 320 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 AMBNQ9NP70 447 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 ITM2CQ9NQX7 267 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 MS4A12Q9NXJ0 267 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 FTSJ1Q9UET6 329 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 CFL2Q9Y281 166 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 HELZP42694 1942 aaKnown RBP12.52□□□□□ -0.4
USB1-207ENST00000563149 A0A075B6Q4 140 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 A0A1W2PRB8 838 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 CACNB4O00305 520 aaPredicted RBP12.52□□□□□ -0.41
USB1-207ENST00000563149 TGM5O43548 720 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 PQBP1O60828 265 aaKnown RBP12.52□□□□□ -0.41
USB1-207ENST00000563149 TNFRSF1BP20333 461 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 UQCRC2P22695 453 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 DDX6P26196 483 aaKnown RBP eCLIP12.52□□□□□ -0.41
USB1-207ENST00000563149 GRK5P34947 590 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 GSSP48637 474 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
USB1-207ENST00000563149 NUDT6P53370 316 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 TBPL1P62380 186 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 SELENBP1Q13228 472 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 NOGQ13253 232 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 ZNF658BQ4V348 819 aaPredicted RBP12.52□□□□□ -0.41
USB1-207ENST00000563149 ARSIQ5FYB1 569 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 ZNF648Q5T619 568 aaPredicted RBP12.52□□□□□ -0.41
USB1-207ENST00000563149 FRMPD2BQ6IN97 320 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 ARMCX6Q7L4S7 300 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 OTOP2Q7RTS6 562 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 ADIPOR2Q86V24 386 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 GALNT6Q8NCL4 622 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 IRF7Q92985 503 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 SLC35B4Q969S0 331 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 FAM129BQ96TA1 746 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 SIAEQ9HAT2 523 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 POLE4Q9NR33 117 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 CRNNQ9UBG3 495 aaPredicted RBP12.52□□□□□ -0.41
USB1-207ENST00000563149 GULP1Q9UBP9 304 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 FAM8A1Q9UBU6 413 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 KCND3Q9UK17 655 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 ATP11BQ9Y2G3 1177 aa12.52□□□□□ -0.41
USB1-207ENST00000563149 WBP11Q9Y2W2 641 aaKnown RBP12.52□□□□□ -0.41
USB1-207ENST00000563149 PRAMEF33A0A0G2JMD5 474 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 LOC100506127A0A0U1RQW1 187 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 TRBC2A0A5B9 178 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PIPSLA2A3N6 862 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 NEDD8-MDP1E9PL57 170 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 CCRL2O00421 344 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PCDH17O14917 1159 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 SNPHO15079 494 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PRAMEF10O60809 474 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 SH3BGRLO75368 114 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 IFNW1P05000 195 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 DDX5P17844 614 aaKnown RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 SLC15A1P46059 708 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 DSTNP60981 165 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 RHAGQ02094 409 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 SLC13A2Q13183 592 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 SLC5A12Q1EHB4 618 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 MPEG1Q2M385 716 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 ZNF805Q5CZA5 627 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 MEDAGQ5VYS4 303 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 NXPE4Q6UWF7 544 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PTCHD4Q6ZW05 846 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 AKAP14Q86UN6 197 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 RNF130Q86XS8 419 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 SYTL1Q8IYJ3 562 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 FAM46DQ8NEK8 389 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 FLCNQ8NFG4 579 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 OR9Q2Q8NGE9 314 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 OR9A1PQ8NGU1 263 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 SLC5A11Q8WWX8 675 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 AP2M1Q96CW1 435 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 Q96MT0 163 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 MGLLQ99685 303 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 NLNQ9BYT8 704 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 RC3H2Q9HBD1 1191 aaKnown RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 MOV10Q9HCE1 1003 aaKnown RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 ASAH2Q9NR71 780 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 SACM1LQ9NTJ5 587 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 IL36AQ9UHA7 158 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 CFAP20Q9Y6A4 193 aaKnown RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 J3KTA2 159 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 ZW10O43264 779 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 TBX19O60806 448 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 OXSR1O95747 527 aaPredicted RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 DLGAP3O95886 979 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 ADAP00813 363 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 TGFB1P01137 390 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PDHA2P29803 388 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 HOXD12P35452 270 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 TIE1P35590 1138 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PPM1AP35813 382 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 MAGEA10P43363 369 aaPredicted RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 TPTEP56180 551 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 TAS2R50P59544 299 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms