RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 KITP10721 976 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 RNH1P13489 461 aaKnown RBP17.8■□□□□ 0.44
RAB40C-207ENST00000563109 MDH1P40925 334 aaKnown RBP17.8■□□□□ 0.44
RAB40C-207ENST00000563109 GUCY1A3Q02108 690 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 TBL3Q12788 808 aaKnown RBP17.8■□□□□ 0.44
RAB40C-207ENST00000563109 TGIF1Q15583 401 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 LCN10Q6JVE6 187 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 ZNF793Q6ZN11 406 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 FAM47EQ6ZV65 393 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 CA13Q8N1Q1 262 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 ENDOVQ8N8Q3 282 aaKnown RBP17.8■□□□□ 0.44
RAB40C-207ENST00000563109 OR5T3Q8NGG3 340 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 OR51Q1Q8NH59 317 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 PIWIL2Q8TC59 973 aaKnown RBP17.8■□□□□ 0.44
RAB40C-207ENST00000563109 GPR87Q9BY21 358 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 SLC26A1Q9H2B4 701 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 WDR54Q9H977 334 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 LYRM4Q9HD34 91 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 SLCO1B3Q9NPD5 702 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 SLC22A11Q9NSA0 550 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 LYARQ9NX58 379 aaKnown RBP17.8■□□□□ 0.44
RAB40C-207ENST00000563109 CTSFQ9UBX1 484 aa17.8■□□□□ 0.44
RAB40C-207ENST00000563109 LOC101059948A0A1B0GTJ6 334 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 TRPC5OSA6NMA1 111 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 TCP11X1B4DZS4 312 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 HDAC3O15379 428 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 KLK10O43240 276 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 CHST10O43529 356 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 IL10P22301 178 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 PRPH2P23942 346 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 BSGP35613 385 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 XCR1P46094 333 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 SYT16Q17RD7 645 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 XKR7Q5GH72 579 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 CCNYL2Q5T2Q4 361 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 WDR75Q8IWA0 830 aaKnown RBP17.79■□□□□ 0.44
RAB40C-207ENST00000563109 EFCAB3Q8N7B9 438 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 CHTF18Q8WVB6 975 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 MIEF2Q96C03 454 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 PEX11GQ96HA9 241 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 METTL2AQ96IZ6 378 aaKnown RBP17.79■□□□□ 0.44
RAB40C-207ENST00000563109 PPP3R2Q96LZ3 170 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 OR1F2PQ96R84 312 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 ZNF717Q9BY31 904 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-207ENST00000563109 DDX31Q9H8H2 851 aaKnown RBP17.79■□□□□ 0.44
RAB40C-207ENST00000563109 LRTM1Q9HBL6 345 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 C1orf109Q9NX04 203 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 PHF11Q9UIL8 331 aa17.79■□□□□ 0.44
RAB40C-207ENST00000563109 IGLV3-12A0A075B6K2 115 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 A0A0A6YYD5 115 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 NPIPB8E9PQR5 432 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 PCDH7O60245 1069 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 SEC22BO75396 215 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 EEDO75530 441 aaKnown RBP17.78■□□□□ 0.44
RAB40C-207ENST00000563109 KLK1P06870 262 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 JAK1P23458 1154 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 PTPN4P29074 926 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 FOLR3P41439 243 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 MAPK12P53778 367 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 LIM2P55344 173 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 RAB38P57729 211 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 SLAMF1Q13291 335 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 NKG7Q16617 165 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 GALNTL6Q49A17 601 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 ATP6AP1LQ52LC2 224 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 MFSD4BQ5TF39 518 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 MRPL14Q6P1L8 145 aaKnown RBP17.78■□□□□ 0.44
RAB40C-207ENST00000563109 LRRC69Q6ZNQ3 347 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 VASH2Q86V25 355 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 ZC3H7AQ8IWR0 971 aaKnown RBP17.78■□□□□ 0.44
RAB40C-207ENST00000563109 OR2T11Q8NH01 316 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 STT3BQ8TCJ2 826 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 TUBGCP3Q96CW5 907 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 APIPQ96GX9 242 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 PPP1R36Q96LQ0 422 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 DCBLD2Q96PD2 775 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 RBCK1Q9BYM8 510 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 NUF2Q9BZD4 464 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 TGIF2Q9GZN2 237 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 CCDC134Q9H6E4 229 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 MS4A12Q9NXJ0 267 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 MCM8Q9UJA3 840 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 FBXW2Q9UKT8 454 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 DAPP1Q9UN19 280 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 FARSAQ9Y285 508 aaKnown RBP17.78■□□□□ 0.44
RAB40C-207ENST00000563109 MRPS33Q9Y291 106 aaKnown RBP17.78■□□□□ 0.44
RAB40C-207ENST00000563109 CCL27Q9Y4X3 112 aa17.78■□□□□ 0.44
RAB40C-207ENST00000563109 GNG14A0A1W2PPG7 69 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 LSM1O15116 133 aaKnown RBP17.77■□□□□ 0.44
RAB40C-207ENST00000563109 GUCY1B2O75343 617 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 VPS4BO75351 444 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 JUNP05412 331 aaKnown RBP17.77■□□□□ 0.44
RAB40C-207ENST00000563109 ZGLP1P0C6A0 271 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 FAM58BPP0C7Q3 252 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 LIFP15018 202 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 TIA1P31483 386 aaKnown RBP eCLIP17.77■□□□□ 0.44
RAB40C-207ENST00000563109 EIF2S3P41091 472 aaKnown RBP17.77■□□□□ 0.44
RAB40C-207ENST00000563109 RPL38P63173 70 aaKnown RBP17.77■□□□□ 0.44
RAB40C-207ENST00000563109 RUNX2Q13950 521 aa17.77■□□□□ 0.44
RAB40C-207ENST00000563109 BROXQ5VW32 411 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms