RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 C17orf62Q9BQA9 187 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 CHID1Q9BWS9 393 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 TM9SF3Q9HD45 589 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 PILRAQ9UKJ1 303 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 AXIN1O15169 862 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 ERI3O43414 337 aaKnown RBP12.27□□□□□ -0.44
SNX1-211ENST00000560829 FAM58BPP0C7Q3 252 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 MAGP20916 626 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 ATP5A1P25705 553 aaKnown RBP12.27□□□□□ -0.44
SNX1-211ENST00000560829 HSPA13P48723 471 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 PCBP4P57723 403 aaKnown RBP12.27□□□□□ -0.44
SNX1-211ENST00000560829 HHEXQ03014 270 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 SIM2Q14190 667 aaPredicted RBP12.27□□□□□ -0.44
SNX1-211ENST00000560829 SLC9A5Q14940 896 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 TOR1AIP1Q5JTV8 583 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 FCRL6Q6DN72 434 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 IRGCQ6NXR0 463 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 TRIM40Q6P9F5 258 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 SPESP1Q6UW49 350 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 ASPGQ86U10 573 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 SFTPA2Q8IWL1 248 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 DEFB119Q8N690 84 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 PACRGLQ8N7B6 248 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 AMER3Q8N944 861 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 FAM46DQ8NEK8 389 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 OR52N2Q8NGI0 321 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 NETO1Q8TDF5 533 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 OR5P2Q8WZ92 322 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 OR2A5Q96R48 311 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 MAGIXQ9H6Y5 334 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 YY1AP1Q9H869 796 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 COQ10BQ9H8M1 238 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 GPATCH2Q9NW75 528 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 TEX10Q9NXF1 929 aaPredicted RBP12.27□□□□□ -0.44
SNX1-211ENST00000560829 SIT1Q9Y3P8 196 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 ASB4Q9Y574 426 aa12.27□□□□□ -0.44
SNX1-211ENST00000560829 GSAPA4D1B5 854 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 OR5K3A6NET4 321 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 TPST1O60507 370 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 GUCY1B2O75343 617 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 PRSS23O95084 383 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 NXPH1P58417 271 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 CHRNB3Q05901 458 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 RGS1Q08116 209 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 TGM3Q08188 693 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 VAC14Q08AM6 782 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 FADDQ13158 208 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 MLC1Q15049 377 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 PPP4R4Q6NUP7 873 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 ZCCHC8Q6NZY4 707 aaKnown RBP12.27□□□□□ -0.45
SNX1-211ENST00000560829 FIGLAQ6QHK4 219 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 TRIM73Q86UV7 250 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 ACOT4Q8N9L9 421 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 OR10G6Q8NH81 332 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 DNASE2BQ8WZ79 361 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 NCLNQ969V3 563 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 GAL3ST3Q96A11 431 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 ZNF597Q96LX8 424 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 HSPA12BQ96MM6 686 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 RNF145Q96MT1 663 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 SEPHS2Q99611 448 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 SLC35A5Q9BS91 424 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 FAIM2Q9BWQ8 316 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 EPS8L2Q9H6S3 715 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 UCK1Q9HA47 277 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 NEUROD4Q9HD90 331 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 SLAMF7Q9NQ25 335 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 C8orf4Q9NR00 106 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 ACSS1Q9NUB1 689 aaPredicted RBP12.27□□□□□ -0.45
SNX1-211ENST00000560829 HRASLS2Q9NWW9 162 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 RAB26Q9ULW5 256 aa12.27□□□□□ -0.45
SNX1-211ENST00000560829 PLXND1Q9Y4D7 1925 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 TRIOO75962 3097 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 STK25O00506 426 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 VILLO15195 856 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 PDPK1O15530 556 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 DENRO43583 198 aaKnown RBP12.26□□□□□ -0.45
SNX1-211ENST00000560829 CTSVO60911 334 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 LDLRP01130 860 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 MAOBP27338 520 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 FASLGP48023 281 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.26□□□□□ -0.45
SNX1-211ENST00000560829 NDUFAF5Q5TEU4 345 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 FKBP9P1Q75LS8 142 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 OOSP2Q86WS3 158 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 GKN2Q86XP6 184 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 SDR16C5Q8N3Y7 309 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 FAM86B1Q8N7N1 296 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 PSMA8Q8TAA3 256 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 BAHD1Q8TBE0 780 aaPredicted RBP12.26□□□□□ -0.45
SNX1-211ENST00000560829 PNPT1Q8TCS8 783 aaKnown RBP12.26□□□□□ -0.45
SNX1-211ENST00000560829 NR1H4Q96RI1 486 aaPredicted RBP12.26□□□□□ -0.45
SNX1-211ENST00000560829 CIB1Q99828 191 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 MACROD1Q9BQ69 325 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 ABCG4Q9H172 646 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 RAD21L1Q9H4I0 556 aa12.26□□□□□ -0.45
SNX1-211ENST00000560829 SAMD4AQ9UPU9 718 aaKnown RBP12.26□□□□□ -0.45
SNX1-211ENST00000560829 A0A0G2JN53 185 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 A0A0J9YY10 115 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 FAM149AA5PLN7 773 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms