RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 SCRG1O75711 98 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SLCO2B1O94956 709 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CPNE6O95741 557 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 WNT1P04628 370 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 BCHEP06276 602 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CCNYL3P0C7X3 344 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TFPIP10646 304 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 NELFEP18615 380 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 FBLP22087 321 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 MPIP34949 423 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 PFN3P60673 137 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 DMTNQ08495 405 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ZNF763Q0D2J5 394 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 KCNAB2Q13303 367 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 OR5M10Q6IEU7 315 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SPESP1Q6UW49 350 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 RP9Q8TA86 221 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 NAT6Q93015 286 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 MAL2Q969L2 176 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ZBED6CLQ96FA7 236 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 RMND5BQ96G75 393 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 COL21A1Q96P44 957 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SH3GL1Q99961 368 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ROGDIQ9GZN7 287 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 OR52A5Q9H2C5 316 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 KLHL31Q9H511 634 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 KLHL28Q9NXS3 571 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TAS2R1Q9NYW7 299 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 COPS7AQ9UBW8 275 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ADGRE2Q9UHX3 823 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 PTBP2Q9UKA9 531 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ANGPTL2Q9UKU9 493 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ICKQ9UPZ9 632 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ACACBO00763 2458 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 DOCK9Q9BZ29 2069 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 NPIPA5A0A0B4J1W7 369 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TEX51A0A1B0GUA7 166 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 C17orf113A0A1B0GUU1 675 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 NPIPA7E9PJI5 369 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 G3V3Y1 287 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CLIC1O00299 241 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ARHGAP33O14559 1287 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 OR7A17O14581 309 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TIPRLO75663 272 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 KLHL18O94889 574 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 RPS17P08708 135 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 POU2F2P09086 479 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 NPIPA8P0DM63 369 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 PRPS2P11908 318 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ITGAXP20702 1163 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 GRK6P43250 576 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CCR5P51681 352 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TRAF3Q13114 568 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 GRM7Q14831 915 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ZNF423Q2M1K9 1284 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 VWA2Q5GFL6 755 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SAMD4BQ5PRF9 694 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 C18orf63Q68DL7 685 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 GLYATQ6IB77 296 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 FRMPD2BQ6IN97 320 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CDC73Q6P1J9 531 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 EPGNQ6UW88 154 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SPATA19Q7Z5L4 167 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TRIM69Q86WT6 500 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 PPP1R3BQ86XI6 285 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 RNF130Q86XS8 419 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ULK2Q8IYT8 1036 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SLC22A18ASQ8N1D0 253 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ACOT4Q8N9L9 421 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TTLQ8NG68 377 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 FBXO27Q8NI29 283 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ZNF563Q8TA94 476 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 MZB1Q8WU39 189 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 C8orf44Q96CB5 159 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SPRTNQ9H040 489 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 PIEZO2Q9H5I5 2752 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 KIR3DX1Q9H7L2 352 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TMEM9Q9P0T7 183 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CDC14AQ9UNH5 594 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SLC9A8Q9Y2E8 581 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 GREB1Q4ZG55 1949 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 PCNX1Q96RV3 2341 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 EME2A4GXA9 379 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 LMO7DNF2Z398 122 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ARNTLO00327 626 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TRIM38O00635 465 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SORBS2O94875 1100 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TSPAN12O95859 305 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 OPN1LWP04000 364 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CYP4B1P13584 511 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 IL7RP16871 459 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 PRPS1L1P21108 318 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CBLP22681 906 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ITGA3P26006 1051 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TIA1P31483 386 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ARRB2P32121 409 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 BCL6P41182 706 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CCT3P49368 545 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 ANXA11P50995 505 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 HK2P52789 917 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms