RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 AMHR2Q16671 573 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 FBXO48Q5FWF7 155 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 ZNF549Q6P9A3 640 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 LCLAT1Q6UWP7 414 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 MPZL3Q6UWV2 235 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 MRPL10Q7Z7H8 261 aaKnown RBP18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 PNPLA1Q8N8W4 532 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 ERMAPQ96PL5 475 aaPredicted RBP18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 TMEM43Q9BTV4 400 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 NMUR1Q9HB89 426 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 TMPRSS4Q9NRS4 437 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 HECAQ9UBI9 543 aaPredicted RBP18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 KCNK7Q9Y2U2 307 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 ZNF451Q9Y4E5 1061 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 SLC22A7Q9Y694 548 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 SIP14410 1827 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 BPTFQ12830 3046 aa18.4■□□□□ 0.54
SEMA4B-215ENST00000560089 LAMA2P24043 3122 aaKnown RBP18.39■□□□□ 0.54
SEMA4B-215ENST00000560089 SLC28A1O00337 649 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 EIF1BO60739 113 aaKnown RBP18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 MLYCDO95822 493 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 DHFRP00374 187 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 ADRB1P08588 477 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 NCF1P14598 390 aaPredicted RBP18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 EIF1P41567 113 aaKnown RBP18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 CRYBB2P43320 205 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 GSTM5P46439 218 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 VSX2P58304 361 aaPredicted RBP18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 IL18Q14116 193 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 FGL2Q14314 439 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 P2RY14Q15391 338 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 MPEG1Q2M385 716 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 FAHD1Q6P587 224 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 NLRC3Q7RTR2 1065 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 TRIM69Q86WT6 500 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 ZBTB18Q99592 522 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 CDCA4Q9BXL8 241 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 CXCL16Q9H2A7 254 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 THUMPD1Q9NXG2 353 aaKnown RBP18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 STUB1Q9UNE7 303 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 SSR3Q9UNL2 185 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 SMIM30A4D0T7 59 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 MPTX1A8MV57 137 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 SCG5P05408 212 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 FGF2P09038 288 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 G6PDP11413 515 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 CAMK2DQ13557 499 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 ADGRF3Q8IZF5 1079 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 C7orf31Q8N865 590 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 OR6P1Q8NGX9 317 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 TMEM40Q8WWA1 233 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 CENPIQ92674 756 aaPredicted RBP18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 HGDQ93099 445 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 GABARAPL3Q9BY60 117 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 REEP1Q9H902 201 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 TMEM45AQ9NWC5 275 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 FZD10Q9ULW2 581 aa18.39■□□□□ 0.53
SEMA4B-215ENST00000560089 A0A0G2JPF8 293 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 HNRNPCL3B7ZW38 293 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 ADRA2AP08913 450 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 ZNF806P0C7X5 589 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 HNRNPCL4P0DMR1 293 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 DEFA5Q01523 94 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 PAFAH1B3Q15102 231 aaKnown RBP18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 PIM3Q86V86 326 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 CLEC4CQ8WTT0 213 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 SLC13A3Q8WWT9 602 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 C10orf90Q96M02 699 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 SLC38A2Q96QD8 506 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 ABCC13Q9NSE7 274 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 C1orf109Q9NX04 203 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 TRBV23-1A0A0A0MS06 115 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 LCHNA4D1U4 455 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 POM121CA8CG34 1229 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 E9PQ18 207 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 DUSP11O75319 330 aaKnown RBP18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 LGI1O95970 557 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 CYP4F8P98187 520 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 SURF1Q15526 300 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 GTDC1Q4AE62 458 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 MANEALQ5VSG8 457 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 CNIH2Q6PI25 160 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 C3P1Q6ZMU1 363 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 TCEAL3Q969E4 200 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 FAM120BQ96EK7 910 aaKnown RBP18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 C11orf84Q9BUA3 381 aaPredicted RBP18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 MKL2Q9ULH7 1088 aa18.38■□□□□ 0.53
SEMA4B-215ENST00000560089 AIPO00170 330 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 IFRD1O00458 451 aaPredicted RBP18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 PER2O15055 1255 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 FABP3P05413 133 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 PRDX3P30048 256 aaKnown RBP18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 SLC14A2Q15849 920 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 ZNF628Q5EBL2 1059 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 HES5Q5TA89 166 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 RANBP10Q6VN20 620 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 FTMTQ8N4E7 242 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 LRRC46Q96FV0 321 aa18.37■□□□□ 0.53
SEMA4B-215ENST00000560089 OTUB1Q96FW1 271 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms