RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 PRR19A6NJB7 356 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TNFRSF11BO00300 401 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 PLPP1O14494 284 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 PDPK1O15530 556 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 NDUFS4O43181 175 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 RGS10O43665 173 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 KDM1AO60341 852 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MITFO75030 526 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 NDUFS2O75306 463 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 SH3BGRLO75368 114 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 CLEC3AO75596 197 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 PDE9AO76083 593 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 BCL10O95999 233 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 C1QCP02747 245 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 NTRK1P04629 796 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 PCCBP05166 539 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 CA3P07451 260 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 AGXTP21549 392 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MATN1P21941 496 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 RRM2P31350 389 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 CHI3L1P36222 383 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 GGT2P36268 569 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TNFRSF4P43489 277 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 HMGA2P52926 109 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MAPK12P53778 367 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 DSTNP60981 165 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 CDK6Q00534 326 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MC1RQ01726 317 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MEF2AQ02078 507 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 C16orf72Q14CZ0 275 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MLC1Q15049 377 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MOGQ16653 247 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 COX20Q5RI15 118 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MLIPQ5VWP3 458 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 EGFLAMQ63HQ2 1017 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 SAXO2Q658L1 398 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 ZNF776Q68DI1 518 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TANGO2Q6ICL3 276 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 KIAA1161Q6NSJ0 714 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 REEP3Q6NUK4 255 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 ZNF852Q6ZMS4 543 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 FAM92BQ6ZTR7 304 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 GET4Q7L5D6 327 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 PRSS48Q7RTY5 328 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TSEN54Q7Z6J9 526 aaKnown RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 B3GNT8Q7Z7M8 397 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 GALNT5Q7Z7M9 940 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 GALNT10Q86SR1 603 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 FAM124AQ86V42 546 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 NUDT13Q86X67 352 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TP53I13Q8NBR0 393 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 ZNF740Q8NDX6 193 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 BPIFB6Q8NFQ5 453 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 OR4C15Q8NGM1 316 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 OR2L8Q8NGY9 312 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 NFKBIDQ8NI38 313 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 PSMA8Q8TAA3 256 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TBC1D15Q8TC07 691 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 SPPL2AQ8TCT8 520 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 FAR1Q8WVX9 515 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 ASB12Q8WXK4 309 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 FCGR1BQ92637 280 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 FKBP10Q96AY3 582 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 RGMAQ96B86 450 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TAMM41Q96BW9 452 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 IL17FQ96PD4 163 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 ZNF300Q96RE9 604 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 SIGLEC11Q96RL6 698 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 BARD1Q99728 777 aaKnown RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 C1QTNF7Q9BXJ2 289 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 C1QTNF2Q9BXJ5 285 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 ZNF717Q9BY31 904 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 NAA50Q9GZZ1 169 aaKnown RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 WDR26Q9H7D7 661 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MVB12BQ9H7P6 319 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 LIN28AQ9H9Z2 209 aaKnown RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 ACSS1Q9NUB1 689 aaPredicted RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TAS2R7Q9NYW3 318 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 EHD3Q9NZN3 535 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 NDUFAF4Q9P032 175 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TAAR2Q9P1P5 351 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 SLC23A2Q9UGH3 650 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TAC3Q9UHF0 121 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 RAPGEFL1Q9UHV5 662 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 HCN2Q9UL51 889 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 TDRKHQ9Y2W6 561 aaKnown RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 ENPP4Q9Y6X5 453 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 MDC1Q14676 2089 aaKnown RBP7.72□□□□□ -1.17
SMAD3-212ENST00000559937 COL4A2P08572 1712 aa7.72□□□□□ -1.17
SMAD3-212ENST00000559937 A0A1W2PPV9 198 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 TRBC2A0A5B9 178 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SLC22A1O15245 554 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 MID1O15344 667 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 FAM20BO75063 409 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SNRNP200O75643 2136 aaKnown RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 DIRAS1O95057 198 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 GABARAPO95166 117 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 PCDH8O95206 1070 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 TBX6O95947 436 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 INHBBP09529 407 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms