RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 LSM1O15116 133 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 HDAC3O15379 428 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 NDUFS4O43181 175 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TNFSF14O43557 240 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 KDM1AO60341 852 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 EEDO75530 441 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 RFPL3O75679 317 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 RSL1D1O76021 490 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 KLHL18O94889 574 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 FAM107AO95990 144 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ENO1P06733 434 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 ZNF888P0CJ79 500 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 TROVE2P10155 538 aaKnown RBP eCLIP4.96□□□□□ -1.62
SPG11-220ENST00000559933 THRAP10827 490 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 CCL4P13236 92 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 IL1RNP18510 177 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ACP1P24666 158 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TACR1P25103 407 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 GDNFP39905 211 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ETV5P41161 510 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 CASP2P42575 452 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 GPR3P46089 330 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 GABRA4P48169 554 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ARFIP2P53365 341 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 PLA2G16P53816 162 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 DIO3P55073 304 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 RAB8AP61006 207 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ARF3P61204 181 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 OLR1P78380 273 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 RAE1P78406 368 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 ABATP80404 500 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 GALNT1Q10472 559 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 C16orf72Q14CZ0 275 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TBCCQ15814 346 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 MLANAQ16655 118 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 IMPG1Q17R60 797 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 LIPJQ5W064 366 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ANKRD26P1Q6NSI1 321 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 METTL2BQ6P1Q9 378 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 EPGNQ6UW88 154 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TMIGD1Q6UXZ0 262 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 DNAJC14Q6Y2X3 702 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 ZNF793Q6ZN11 406 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 Q6ZSR9 355 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 RNF44Q7L0R7 432 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 SLCO6A1Q86UG4 719 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 PDSS2Q86YH6 399 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 SLITRK4Q8IW52 837 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TMEM151BQ8IW70 566 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 LAS2Q8IYD9 372 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 CLYBLQ8N0X4 340 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 KRT78Q8N1N4 520 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 DNAJC22Q8N4W6 341 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 C1orf52Q8N6N3 182 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 MFSD9Q8NBP5 474 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 OR4K1Q8NGD4 311 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 OR9I1Q8NGQ6 314 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 OR1L3Q8NH93 324 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 CDC26Q8NHZ8 85 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 BCAS4Q8TDM0 211 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 CREB3L4Q8TEY5 395 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 USP7Q93009 1102 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 NAT6Q93015 286 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 UCN3Q969E3 161 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 SLC22A18Q96BI1 424 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ZDHHC12Q96GR4 267 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 SEC16BQ96JE7 1060 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 MAELQ96JY0 434 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 RILPQ96NA2 401 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TEFMQ96QE5 360 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 ALPK1Q96QP1 1244 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 OR2A5Q96R48 311 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 GFM1Q96RP9 751 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 CTRCQ99895 268 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ZFYVE21Q9BQ24 234 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 AIF1LQ9BQI0 150 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ZNF717Q9BY31 904 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 TRIM55Q9BYV6 548 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 NMUR2Q9GZQ4 415 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 SPRTNQ9H040 489 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 NSRP1Q9H0G5 558 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 ZNF768Q9H5H4 540 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 APMAPQ9HDC9 416 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 LHX9Q9NQ69 397 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TMEM184CQ9NVA4 438 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 GPATCH2Q9NW75 528 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 OCIAD1Q9NX40 245 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 SLAMF8Q9P0V8 285 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 KLHL14Q9P2G3 628 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 BAIAP2L1Q9UHR4 511 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 PILRAQ9UKJ1 303 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 SNX6Q9UNH7 406 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 RUVBL1Q9Y265 456 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 DLGAP4Q9Y2H0 992 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 ENTPD2Q9Y5L3 495 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 UNC13CQ8NB66 2214 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 KIF26BQ2KJY2 2108 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 DCHS1Q96JQ0 3298 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 CEP250Q9BV73 2442 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms